Levi Waldron

Cited by

	All	Since 2016
Citations	14876	12205
h-index	36	33
i10-index	61	56

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Co-authors

Curtis HuttenhowerDepartment of Biostatistics, Harvard School of Public HealthVerified email at hsph.harvard.edu
Nicola SegataDepartment CIBIO, University of TrentoVerified email at unitn.it
Igor JurisicaVerified email at ai.utoronto.ca
Giovanni ParmigianiProfessor Department of Data Science, DFCIVerified email at dfci.harvard.edu
Michael BirrerProfessor Medicine HMSVerified email at partners.org
Markus RiesterNovartis Institutes for Biomedical ResearchVerified email at novartis.com
Marcel M. Ramos PérezCUNY Graduate School of Public Health and Health PolicyVerified email at sph.cuny.edu
Benjamin Haibe-KainsScientist (Principal Investigator), Princess Margaret Cancer Centre, University Health NetworkVerified email at uhnresearch.ca
Fei-Fei LiuUniversity Health NetworkVerified email at rmp.uhn.ca
Patricia Pintor dos ReisSão Paulo State University (UNESP)Verified email at unesp.br
Ludwig GeistlingerCenter for Computational Biomedicine, Harvard Medical SchoolVerified email at hms.harvard.edu
Aedin CulhaneDept of Data Science, Dana-Farber Cancer Institute/ Dept of Biostatistics, Harvard TH Chan SchoolVerified email at ds.dfci.harvard.edu
X C MorganUniversity of OtagoVerified email at otago.ac.nz
Shuji OginoProf (Pathol & Epidemiol), Harvard; Broad Institute; Dana-Farber HCC Immunology Prog; MPE Chief, BWHVerified email at bwh.harvard.edu
Lucas SchifferSection of Computational Biomedicine, Boston University School of MedicineVerified email at bu.edu
Sean DavisNational Cancer Institute, National Institutes of HealthVerified email at mail.nih.gov
Jennifer Beam DowdAssociate Professor of Demography & Population Health, University of OxfordVerified email at sociology.ox.ac.uk
Yujin HoshidaUniversity of Texas Southwestern Medical CenterVerified email at utsouthwestern.edu
Eric Alan FranzosaSenior Research Scientist / Harvard T. H. Chan School of Public HealthVerified email at hsph.harvard.edu
Dr. Eric LechmanUniversity Health NetworkVerified email at uhnres.utoronto.ca

Levi Waldron

City University of New York School of Public Health

Verified email at sph.cuny.edu - Homepage

Bioinformatics


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Metagenomic biomarker discovery and explanation N Segata, J Izard, L Waldron, D Gevers, L Miropolsky, WS Garrett, ... Genome biology 12 (6), 1-18, 2011	5112	2011
Orchestrating high-throughput genomic analysis with Bioconductor W Huber, VJ Carey, R Gentleman, S Anders, M Carlson, BS Carvalho, ... Nature methods 12 (2), 115, 2015	1931	2015
Metagenomic microbial community profiling using unique clade-specific marker genes N Segata, L Waldron, A Ballarini, V Narasimhan, O Jousson, ... Nature methods 9 (8), 811-814, 2012	1200	2012
Stem cell gene expression programs influence clinical outcome in human leukemia K Eppert, K Takenaka, ER Lechman, L Waldron, B Nilsson, P Van Galen, ... Nature medicine 17 (9), 1086-1093, 2011	836	2011
Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples N Segata, SK Haake, P Mannon, KP Lemon, L Waldron, D Gevers, ... Genome biology 13 (6), 1-18, 2012	624	2012
Assessment of colorectal cancer molecular features along bowel subsites challenges the conception of distinct dichotomy of proximal versus distal colorectum M Yamauchi, T Morikawa, A Kuchiba, Y Imamura, ZR Qian, R Nishihara, ... Gut 61 (6), 847-854, 2012	470	2012
A guide to enterotypes across the human body: meta-analysis of microbial community structures in human microbiome datasets O Koren, D Knights, A Gonzalez, L Waldron, N Segata, R Knight, ... PLoS Comput Biol 9 (1), e1002863, 2013	436	2013
Comprehensive MicroRNA profiling for head and neck squamous cell carcinomas ABY Hui, M Lenarduzzi, T Krushel, L Waldron, M Pintilie, W Shi, ... Clinical cancer research 16 (4), 1129-1139, 2010	416	2010
Relating the metatranscriptome and metagenome of the human gut EA Franzosa, XC Morgan, N Segata, L Waldron, J Reyes, AM Earl, ... Proceedings of the National Academy of Sciences 111 (22), E2329-E2338, 2014	414	2014
MicroRNA-301 mediates proliferation and invasion in human breast cancer W Shi, K Gerster, NM Alajez, J Tsang, L Waldron, M Pintilie, AB Hui, ... Cancer research 71 (8), 2926-2937, 2011	252	2011
mRNA transcript quantification in archival samples using multiplexed, color-coded probes PP Reis, L Waldron, RS Goswami, W Xu, Y Xuan, B Perez-Ordonez, ... BMC biotechnology 11 (1), 1-10, 2011	229	2011
Machine learning meta-analysis of large metagenomic datasets: tools and biological insights E Pasolli, DT Truong, F Malik, L Waldron, N Segata PLoS computational biology 12 (7), e1004977, 2016	221	2016
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ... Nature medicine 25 (4), 679-689, 2019	208	2019
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (4), 667-678, 2019	163	2019
Risk prediction for late-stage ovarian cancer by meta-analysis of 1525 patient samples M Riester, W Wei, L Waldron, AC Culhane, L Trippa, E Oliva, S Kim, ... JNCI: Journal of the National Cancer Institute 106 (5), 2014	153	2014
curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome BF Ganzfried, M Riester, B Haibe-Kains, T Risch, S Tyekucheva, I Jazic, ... Database 2013, 2013	134	2013
Genotype and time of day shape the Populus drought response O Wilkins, L Waldron, H Nahal, NJ Provart, MM Campbell The Plant Journal 60 (4), 703-715, 2009	127	2009
Racial/ethnic disparities in genomic sequencing DE Spratt, T Chan, L Waldron, C Speers, FY Feng, OO Ogunwobi, ... JAMA oncology 2 (8), 1070-1074, 2016	125	2016
Associations between host gene expression, the mucosal microbiome, and clinical outcome in the pelvic pouch of patients with inflammatory bowel disease XC Morgan, B Kabakchiev, L Waldron, AD Tyler, TL Tickle, R Milgrom, ... Genome biology 16 (1), 1-15, 2015	125	2015
Accessible, curated metagenomic data through ExperimentHub E Pasolli, L Schiffer, P Manghi, A Renson, V Obenchain, DT Truong, ... Nature methods 14 (11), 1023, 2017	119	2017

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