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Thies Gehrmann
Thies Gehrmann
PostDoc, Leiden University Medical Center
Verified email at lumc.nl - Homepage
Title
Cited by
Cited by
Year
Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation
D Vu, M Groenewald, M De Vries, T Gehrmann, B Stielow, U Eberhardt, ...
Studies in mycology 92 (1), 135-154, 2019
5662019
Mycobacterium tuberculosis whole genome sequences from Southern India suggest novel resistance mechanisms and the need for region-specific diagnostics
AL Manson, T Abeel, JE Galagan, JC Sundaramurthi, A Salazar, ...
Clinical Infectious Diseases 64 (11), 1494-1501, 2017
562017
Transcription factors of Schizophyllum commune involved in mushroom formation and modulation of vegetative growth
JF Pelkmans, MB Patil, T Gehrmann, MJT Reinders, HAB Wösten, ...
Scientific Reports 7 (1), 310, 2017
472017
The transcriptional regulator c2h2 accelerates mushroom formation in Agaricus bisporus
JF Pelkmans, AM Vos, K Scholtmeijer, E Hendrix, JJP Baars, T Gehrmann, ...
Applied Microbiology and Biotechnology 100, 7151-7159, 2016
462016
Nucleus-specific expression in the multinuclear mushroom-forming fungus Agaricus bisporus reveals different nuclear regulatory programs
T Gehrmann, JF Pelkmans, RA Ohm, AM Vos, ASM Sonnenberg, ...
Proceedings of the National Academy of Sciences 115 (17), 4429-4434, 2018
392018
Phyllosticta citricarpa and sister species of global importance to Citrus
V Guarnaccia, T Gehrmann, GJ Silva‐Junior, PH Fourie, S Haridas, D Vu, ...
Molecular plant pathology 20 (12), 1619-1635, 2019
382019
Schizophyllum commune has an extensive and functional alternative splicing repertoire
T Gehrmann, JF Pelkmans, LG Lugones, HAB Wösten, T Abeel, ...
Scientific reports 6 (1), 1-11, 2016
232016
The Genetic Makeup and Expression of the Glycolytic and Fermentative Pathways Are Highly Conserved Within the Saccharomyces Genus
FJ Boonekamp, S Dashko, M Van den Broek, T Gehrmann, JM Daran, ...
Frontiers in genetics 9, 504, 2018
152018
Patterns of conservation and diversification in the fungal polarization network
ET Diepeveen, T Gehrmann, V Pourquié, T Abeel, L Laan
Genome Biology and Evolution 10 (7), 1765-1782, 2018
122018
Design and experimental evaluation of a minimal, innocuous watermarking strategy to distinguish Near-Identical DNA and RNA sequences
FJ Boonekamp, S Dashko, D Duiker, T Gehrmann, M van den Broek, ...
ACS Synthetic Biology 9 (6), 1361-1375, 2020
102020
Proteny: discovering and visualizing statistically significant syntenic clusters at the proteome level
T Gehrmann, MJT Reinders
Bioinformatics 31 (21), 3437-3444, 2015
102015
Citizen-science map of the vaginal microbiome
S Lebeer, S Ahannach, S Wittouck, T Gehrmann, T Eilers, E Oerlemans, ...
42022
Conditional random fields for protein function prediction
T Gehrmann, M Loog, MJT Reinders, D de Ridder
Pattern Recognition in Bioinformatics: 8th IAPR International Conference …, 2013
32013
Randomized, Double-Blind, Placebo-Controlled Trial of a Throat Spray with Selected Lactobacilli in COVID-19 Outpatients
I De Boeck, E Cauwenberghs, I Spacova, T Gehrmann, T Eilers, ...
Microbiology Spectrum 10 (5), e01682-22, 2022
22022
Bioinformatic analysis of genomic and transcriptomic variation in fungi
T Gehrmann
Ecol Monogr 87, e98438, 2018
22018
Genetic Diversity and Population Structure in Bryophyte With Facultative Nannandry
AS Lang, T Gehrmann, N Cronberg
Frontiers in Plant Science 12, 517547, 2021
12021
PLIS: A metabolomic response monitor to a lifestyle intervention study in older adults
FA Bogaards, T Gehrmann, M Beekman, EB Van Den Akker, ...
The FASEB Journal 36 (11), e22578, 2022
2022
Evaluation of a throat spray with lactobacilli in COVID-19 outpatients in a randomized, double-blind, placebo-controlled trial for symptom and viral load reduction
I De Boeck, E Cauwenberghs, I Spacova, T Gehrmann, T Eilers, ...
medRxiv, 2022.03. 17.22272401, 2022
2022
A combined lifestyle intervention induces a sensitization of the blood transcriptomic response to a nutrient challenge
T Gehrmann, M Beekman, J Deelen, L Partridge, O van de Rest, L Mei, ...
bioRxiv, 2021.05. 18.444591, 2021
2021
Variants in RNA-Seq data show a continued mutation rate during strain preservation of Schizophyllum commune
T Gehrmann, JF Pelkmans, LG Lugones, HAB Wösten, T Abeel, ...
bioRxiv, 201012, 2017
2017
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