Thies Gehrmann
Thies Gehrmann
PostDoc, Leiden University Medical Center
Verified email at lumc.nl - Homepage
Title
Cited by
Cited by
Year
Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation
D Vu, M Groenewald, M De Vries, T Gehrmann, B Stielow, U Eberhardt, ...
Studies in mycology 92, 135-154, 2019
1702019
Mycobacterium tuberculosis whole genome sequences from Southern India suggest novel resistance mechanisms and the need for region-specific diagnostics
AL Manson, T Abeel, JE Galagan, JC Sundaramurthi, A Salazar, ...
Clinical Infectious Diseases 64 (11), 1494-1501, 2017
402017
The transcriptional regulator c2h2 accelerates mushroom formation in Agaricus bisporus
JF Pelkmans, AM Vos, K Scholtmeijer, E Hendrix, JJP Baars, T Gehrmann, ...
Applied microbiology and biotechnology 100 (16), 7151-7159, 2016
282016
Transcription factors of Schizophyllum commune involved in mushroom formation and modulation of vegetative growth
JF Pelkmans, MB Patil, T Gehrmann, MJT Reinders, HAB Wösten, ...
Scientific reports 7 (1), 1-11, 2017
222017
Nucleus-specific expression in the multinuclear mushroom-forming fungus Agaricus bisporus reveals different nuclear regulatory programs
T Gehrmann, JF Pelkmans, RA Ohm, AM Vos, ASM Sonnenberg, ...
Proceedings of the National Academy of Sciences 115 (17), 4429-4434, 2018
142018
Proteny: discovering and visualizing statistically significant syntenic clusters at the proteome level
T Gehrmann, MJT Reinders
Bioinformatics 31 (21), 3437-3444, 2015
92015
Schizophyllum commune has an extensive and functional alternative splicing repertoire
T Gehrmann, JF Pelkmans, LG Lugones, HAB Wösten, T Abeel, ...
Scientific reports 6 (1), 1-11, 2016
82016
Phyllosticta citricarpa and sister species of global importance to Citrus
V Guarnaccia, T Gehrmann, GJ Silva‐Junior, PH Fourie, S Haridas, D Vu, ...
Molecular plant pathology 20 (12), 1619-1635, 2019
72019
Patterns of conservation and diversification in the fungal polarization network
ET Diepeveen, T Gehrmann, V Pourquié, T Abeel, L Laan
Genome biology and evolution 10 (7), 1765-1782, 2018
62018
The genetic makeup and expression of the glycolytic and fermentative pathways are highly conserved within the Saccharomyces genus
FJ Boonekamp, S Dashko, M van den Broek, T Gehrmann, JM Daran, ...
Frontiers in genetics 9, 504, 2018
42018
Conditional random fields for protein function prediction
T Gehrmann, M Loog, MJT Reinders, D de Ridder
IAPR International Conference on Pattern Recognition in Bioinformatics, 184-195, 2013
22013
Bioinformatic Analysis of Genomic and Transcriptomic Variation in Fungi
T Gehrmann
Delft University of Technology, 2018
12018
Design and experimental evaluation of a minimal, innocuous watermarking strategy to distinguish near-identical DNA and RNA sequences
FJ Boonekamp, S Dashko, D Duiker, T Gehrmann, M van den Broek, ...
ACS Synthetic Biology, 2020
2020
Variants in RNA-Seq data show a continued mutation rate during strain preservation of Schizophyllum commune
T Gehrmann, JF Pelkmans, LG Lugones, HAB Wösten, T Abeel, ...
BioRxiv, 201012, 2017
2017
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