Ludwig Geistlinger
Ludwig Geistlinger
Center for Computational Biomedicine, Harvard Medical School
Verified email at hms.harvard.edu - Homepage
Title
Cited by
Cited by
Year
Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum
C Gieger, L Geistlinger, E Altmaier, MH De Angelis, F Kronenberg, ...
PLoS Genet 4 (11), e1000282, 2008
6522008
Orchestrating single-cell analysis with Bioconductor
RA Amezquita, ATL Lun, E Becht, VJ Carey, LN Carpp, L Geistlinger, ...
Nature methods 17 (2), 137-145, 2020
772020
Factors influencing the efficiency of generating genetically engineered pigs by nuclear transfer: multi-factorial analysis of a large data set
M Kurome, L Geistlinger, B Kessler, V Zakhartchenko, N Klymiuk, ...
BMC biotechnology 13 (1), 1-13, 2013
712013
From sets to graphs: towards a realistic enrichment analysis of transcriptomic systems
L Geistlinger, G Csaba, R Küffner, N Mulder, R Zimmer
Bioinformatics 27 (13), i366-i373, 2011
662011
Consensus on molecular subtypes of high-grade serous ovarian carcinoma
GM Chen, L Kannan, L Geistlinger, V Kofia, Z Safikhani, DMA Gendoo, ...
Clinical Cancer Research 24 (20), 5037-5047, 2018
40*2018
Bioconductor’s EnrichmentBrowser: seamless navigation through combined results of set-& network-based enrichment analysis
L Geistlinger, G Csaba, R Zimmer
BMC bioinformatics 17 (1), 1-11, 2016
322016
Genome-wide detection of CNVs and their association with meat tenderness in Nelore cattle
VH Silva, LCA Regitano, L Geistlinger, F Pértille, PF Giachetto, ...
PloS one 11 (6), e0157711, 2016
302016
Evolution of protein phosphorylation for distinct functional modules in vertebrate genomes
Z Wang, G Ding, L Geistlinger, H Li, L Liu, R Zeng, Y Tateno, Y Li
Molecular biology and evolution 28 (3), 1131-1140, 2011
272011
Genome-wide association study identifies two novel regions at 11p15. 5-p13 and 1p31 with major impact on acute-phase serum amyloid A
C Marzi, E Albrecht, PG Hysi, V Lagou, M Waldenberger, A Tönjes, ...
PLoS Genet 6 (11), e1001213, 2010
242010
A comprehensive gene regulatory network for the diauxic shift in Saccharomyces cerevisiae
L Geistlinger, G Csaba, S Dirmeier, R Küffner, R Zimmer
Nucleic acids research 41 (18), 8452-8463, 2013
222013
Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits
ASM Cesar, LCA Regitano, JM Reecy, MD Poleti, PSN Oliveira, ...
BMC genomics 19 (1), 1-20, 2018
202018
Detection of co-expressed pathway modules associated with mineral concentration and meat quality in Nelore cattle
WJS Diniz, G Mazzoni, LL Coutinho, P Banerjee, L Geistlinger, ...
Frontiers in genetics 10, 210, 2019
162019
Addressing false discoveries in network inference
T Petri, S Altmann, L Geistlinger, R Zimmer, R Küffner
Bioinformatics 31 (17), 2836-2843, 2015
162015
Toward a gold standard for benchmarking gene set enrichment analysis
L Geistlinger, G Csaba, M Santarelli, M Ramos, L Schiffer, N Turaga, ...
Briefings in bioinformatics 22 (1), 545-556, 2021
142021
HMP16SData: efficient access to the Human Microbiome Project through Bioconductor
L Schiffer, R Azhar, L Shepherd, M Ramos, L Geistlinger, C Huttenhower, ...
Am J Epidemiol 188 (6), 1023-1026, 2018
132018
Widespread modulation of gene expression by copy number variation in skeletal muscle
L Geistlinger, VH da Silva, ASM Cesar, PC Tizioto, L Waldron, R Zimmer, ...
Scientific reports 8 (1), 1-11, 2018
112018
Micropatterning as a tool to identify regulatory triggers and kinetics of actin-mediated endothelial mechanosensing
FA Gegenfurtner, B Jahn, H Wagner, C Ziegenhain, W Enard, ...
Journal of cell science 131 (10), 2018
102018
Tobacco exposure associated with oral microbiota oxygen utilization in the New York City Health and Nutrition Examination Study
F Beghini, A Renson, CP Zolnik, L Geistlinger, M Usyk, TU Moody, ...
Annals of epidemiology 34, 18-25. e3, 2019
82019
A comprehensive manually-curated compendium of bovine transcription factors
M de Souza, A Zerlotini, L Geistlinger, P Tizioto, J Taylor, M Rocha, ...
Scientific reports 8, 13747, 2018
72018
Multiomic Analysis of Subtype Evolution and Heterogeneity in High-Grade Serous Ovarian Carcinoma
L Geistlinger, S Oh, M Ramos, L Schiffer, RS LaRue, CM Henzler, ...
Cancer Research 80 (20), 4335-4345, 2020
42020
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Articles 1–20