Ludwig Geistlinger
Ludwig Geistlinger
Center for Computational Biomedicine, Harvard Medical School
Verified email at - Homepage
Cited by
Cited by
Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum
C Gieger, L Geistlinger, E Altmaier, MH De Angelis, F Kronenberg, ...
PLoS Genet 4 (11), e1000282, 2008
Orchestrating single-cell analysis with Bioconductor
RA Amezquita, ATL Lun, E Becht, VJ Carey, LN Carpp, L Geistlinger, ...
Nature methods 17 (2), 137-145, 2020
Factors influencing the efficiency of generating genetically engineered pigs by nuclear transfer: multi-factorial analysis of a large data set
M Kurome, L Geistlinger, B Kessler, V Zakhartchenko, N Klymiuk, ...
BMC biotechnology 13 (1), 1-13, 2013
From sets to graphs: towards a realistic enrichment analysis of transcriptomic systems
L Geistlinger, G Csaba, R Küffner, N Mulder, R Zimmer
Bioinformatics 27 (13), i366-i373, 2011
Consensus on molecular subtypes of high-grade serous ovarian carcinoma
GM Chen, L Kannan, L Geistlinger, V Kofia, Z Safikhani, DMA Gendoo, ...
Clinical Cancer Research 24 (20), 5037-5047, 2018
Bioconductor’s EnrichmentBrowser: seamless navigation through combined results of set-& network-based enrichment analysis
L Geistlinger, G Csaba, R Zimmer
BMC bioinformatics 17 (1), 1-11, 2016
Genome-wide detection of CNVs and their association with meat tenderness in Nelore cattle
VH Silva, LCA Regitano, L Geistlinger, F Pértille, PF Giachetto, ...
PloS one 11 (6), e0157711, 2016
Evolution of protein phosphorylation for distinct functional modules in vertebrate genomes
Z Wang, G Ding, L Geistlinger, H Li, L Liu, R Zeng, Y Tateno, Y Li
Molecular biology and evolution 28 (3), 1131-1140, 2011
Genome-wide association study identifies two novel regions at 11p15. 5-p13 and 1p31 with major impact on acute-phase serum amyloid A
C Marzi, E Albrecht, PG Hysi, V Lagou, M Waldenberger, A Tönjes, ...
PLoS Genet 6 (11), e1001213, 2010
A comprehensive gene regulatory network for the diauxic shift in Saccharomyces cerevisiae
L Geistlinger, G Csaba, S Dirmeier, R Küffner, R Zimmer
Nucleic acids research 41 (18), 8452-8463, 2013
Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits
ASM Cesar, LCA Regitano, JM Reecy, MD Poleti, PSN Oliveira, ...
BMC genomics 19 (1), 1-20, 2018
Detection of co-expressed pathway modules associated with mineral concentration and meat quality in Nelore cattle
WJS Diniz, G Mazzoni, LL Coutinho, P Banerjee, L Geistlinger, ...
Frontiers in genetics 10, 210, 2019
Addressing false discoveries in network inference
T Petri, S Altmann, L Geistlinger, R Zimmer, R Küffner
Bioinformatics 31 (17), 2836-2843, 2015
Toward a gold standard for benchmarking gene set enrichment analysis
L Geistlinger, G Csaba, M Santarelli, M Ramos, L Schiffer, N Turaga, ...
Briefings in bioinformatics 22 (1), 545-556, 2021
HMP16SData: efficient access to the Human Microbiome Project through Bioconductor
L Schiffer, R Azhar, L Shepherd, M Ramos, L Geistlinger, C Huttenhower, ...
Am J Epidemiol 188 (6), 1023-1026, 2018
Widespread modulation of gene expression by copy number variation in skeletal muscle
L Geistlinger, VH da Silva, ASM Cesar, PC Tizioto, L Waldron, R Zimmer, ...
Scientific reports 8 (1), 1-11, 2018
Micropatterning as a tool to identify regulatory triggers and kinetics of actin-mediated endothelial mechanosensing
FA Gegenfurtner, B Jahn, H Wagner, C Ziegenhain, W Enard, ...
Journal of cell science 131 (10), 2018
Tobacco exposure associated with oral microbiota oxygen utilization in the New York City Health and Nutrition Examination Study
F Beghini, A Renson, CP Zolnik, L Geistlinger, M Usyk, TU Moody, ...
Annals of epidemiology 34, 18-25. e3, 2019
A comprehensive manually-curated compendium of bovine transcription factors
M de Souza, A Zerlotini, L Geistlinger, P Tizioto, J Taylor, M Rocha, ...
Scientific reports 8, 13747, 2018
Multiomic Analysis of Subtype Evolution and Heterogeneity in High-Grade Serous Ovarian Carcinoma
L Geistlinger, S Oh, M Ramos, L Schiffer, RS LaRue, CM Henzler, ...
Cancer Research 80 (20), 4335-4345, 2020
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