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Dr Beatrice Alex
Dr Beatrice Alex
Senior Lecturer and Chancellor's Fellow in Text Mining
Geverifieerd e-mailadres voor ed.ac.uk - Homepage
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Jaar
SARS-CoV-2 Omicron-B. 1.1. 529 leads to widespread escape from neutralizing antibody responses
W Dejnirattisai, J Huo, D Zhou, J Zahradník, P Supasa, C Liu, ...
Cell 185 (3), 467-484. e15, 2022
9282022
Mapping the human genetic architecture of COVID-19
Writing group Writing group leaders Pathak Gita A. 6 Andrews Shea J. 7 Kanai ...
Nature 600 (7889), 472-477, 2021
7482021
Co-infections, secondary infections, and antimicrobial use in patients hospitalised with COVID-19 during the first pandemic wave from the ISARIC WHO CCP-UK study: a multicentre …
CD Russell, CJ Fairfield, TM Drake, L Turtle, RA Seaton, DG Wootton, ...
The Lancet Microbe 2 (8), e354-e365, 2021
2982021
Development and validation of the ISARIC 4C Deterioration model for adults hospitalised with COVID-19: a prospective cohort study
RK Gupta, EM Harrison, A Ho, AB Docherty, SR Knight, M van Smeden, ...
The Lancet Respiratory Medicine 9 (4), 349-359, 2021
2222021
Recognising nested named entities in biomedical text
B Alex, B Haddow, C Grover
Biological, translational, and clinical language processing, 65-72, 2007
2032007
Risk of adverse outcomes in patients with underlying respiratory conditions admitted to hospital with COVID-19: a national, multicentre prospective cohort study using the …
CI Bloom, TM Drake, AB Docherty, BJ Lipworth, SL Johnston, ...
The Lancet Respiratory Medicine 9 (7), 699-711, 2021
1712021
A prenylated dsRNA sensor protects against severe COVID-19
A Wickenhagen, E Sugrue, S Lytras, S Kuchi, M Noerenberg, ML Turnbull, ...
Science 374 (6567), eabj3624, 2021
1532021
Characterisation of in-hospital complications associated with COVID-19 using the ISARIC WHO Clinical Characterisation Protocol UK: a prospective, multicentre cohort study
TM Drake, AM Riad, CJ Fairfield, C Egan, SR Knight, R Pius, ...
The Lancet 398 (10296), 223-237, 2021
1512021
Exploring the boundaries: gene and protein identification in biomedical text
J Finkel, S Dingare, CD Manning, M Nissim, B Alex, C Grover
BMC bioinformatics 6, 1-9, 2005
1402005
Assisted curation: Does text mining really help?
B Alex, C Grover, B Haddow, M Kabadjov, E Klein, M Matthews, ...
Biocomputing 2008, 556-567, 2008
1282008
A Systematic Review of Natural Language Processing Applied to Radiology Reports
A Casey, E Davidson, M Poon, H Dong, D Duma, A Grivas, C Grover, ...
https://arxiv.org/abs/2102.09553, 2021
1222021
Changes in in-hospital mortality in the first wave of COVID-19: a multicentre prospective observational cohort study using the WHO Clinical Characterisation Protocol UK
AB Docherty, RH Mulholland, NI Lone, CP Cheyne, D De Angelis, ...
The Lancet Respiratory Medicine 9 (7), 773-785, 2021
1002021
Non-steroidal anti-inflammatory drug use and outcomes of COVID-19 in the ISARIC Clinical Characterisation Protocol UK cohort: a matched, prospective cohort study
TM Drake, CJ Fairfield, R Pius, SR Knight, L Norman, M Girvan, ...
The Lancet Rheumatology 3 (7), e498-e506, 2021
882021
COVID-19 symptoms at hospital admission vary with age and sex: results from the ISARIC prospective multinational observational study
Infection 49 (5), 889-905, 2021
862021
Detection of neutralising antibodies to SARS-CoV-2 to determine population exposure in Scottish blood donors between March and May 2020
CP Thompson, NE Grayson, RS Paton, JS Bolton, J Lourenço, ...
Eurosurveillance 25 (42), 2000685, 2020
802020
Investigating the effects of selective sampling on the annotation task
B Hachey, B Alex, M Becker
Proceedings of the Ninth Conference on Computational Natural Language …, 2005
792005
SARS-CoV-2-specific nasal IgA wanes 9 months after hospitalisation with COVID-19 and is not induced by subsequent vaccination
F Liew, S Talwar, A Cross, BJ Willett, S Scott, N Logan, MK Siggins, ...
EBioMedicine 87, 2023
732023
Named Entity Recognition for Electronic Health Records: A Comparison of Rule-based and Machine Learning Approaches
PJ Gorinski, H Wu, C Grover, R Tobin, C Talbot, H Whalley, C Sudlow, ...
arXiv:1903.03985, 2019
672019
Adapting the Edinburgh geoparser for historical georeferencing
B Alex, K Byrne, C Grover, R Tobin
International Journal of Humanities and Arts Computing 9 (1), 15-35, 2015
642015
The impact of viral mutations on recognition by SARS-CoV-2 specific T cells
TI de Silva, G Liu, BB Lindsey, D Dong, SC Moore, NS Hsu, D Shah, ...
Iscience 24 (11), 2021
632021
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Artikelen 1–20