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Joshua Udall
Joshua Udall
USDA-ARS
Verified email at usda.gov
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Year
Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres
AH Paterson, JF Wendel, H Gundlach, H Guo, J Jenkins, D Jin, ...
Nature 492 (7429), 423-427, 2012
11762012
Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense
M Wang, L Tu, D Yuan, D Zhu, C Shen, J Li, F Liu, L Pei, P Wang, G Zhao, ...
Nature genetics 51 (2), 224-229, 2019
5052019
Widespread natural variation of DNA methylation within angiosperms
CE Niederhuth, AJ Bewick, L Ji, MS Alabady, KD Kim, Q Li, NA Rohr, ...
Genome biology 17, 1-19, 2016
4722016
Detection of Chromosomal Rearrangements Derived From Homeologous Recombination in Four Mapping Populations of Brassica napus L.
JA Udall, PA Quijada, TC Osborn
Genetics 169 (2), 967-979, 2005
3012005
Duplicate gene expression in allopolyploid Gossypiumreveals two temporally distinct phases of expression evolution
L Flagel, J Udall, D Nettleton, J Wendel
BMC biology 6, 1-9, 2008
2852008
Genomic expression dominance in allopolyploids
RA Rapp, JA Udall, JF Wendel
BMC biology 7, 1-10, 2009
2792009
Polyploidy and crop improvement
JA Udall, JF Wendel
Crop Science 46, S-3-S-14, 2006
2702006
Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (Gossypium)
B Chaudhary, L Flagel, RM Stupar, JA Udall, N Verma, NM Springer, ...
Genetics 182 (2), 503-517, 2009
2542009
Targeted enrichment strategies for next‐generation plant biology
R Cronn, BJ Knaus, A Liston, PJ Maughan, M Parks, JV Syring, J Udall
American journal of botany 99 (2), 291-311, 2012
2372012
Targeted amplicon sequencing (TAS): a scalable next-gen approach to multilocus, multitaxa phylogenetics
SM Bybee, H Bracken-Grissom, BD Haynes, RA Hermansen, RL Byers, ...
Genome biology and evolution 3, 1312-1323, 2011
2332011
Genetic diversity and population structure in the US Upland cotton (Gossypium hirsutum L.)
P Tyagi, MA Gore, DT Bowman, BT Campbell, JA Udall, V Kuraparthy
Theoretical and Applied Genetics 127, 283-295, 2014
2022014
Quantitative trait analysis of seed yield and other complex traits in hybrid spring rapeseed (Brassica napus L.): 1. Identification of genomic regions from winter …
PA Quijada, JA Udall, B Lambert, TC Osborn
Theoretical and Applied Genetics 113, 549-561, 2006
1982006
Development of a 63K SNP Array for Cotton and High-Density Mapping of Intraspecific and Interspecific Populations of Gossypium spp.
AM Hulse-Kemp, J Lemm, J Plieske, H Ashrafi, R Buyyarapu, DD Fang, ...
G3: Genes, Genomes, Genetics 5 (6), 1187-1209, 2015
1932015
A global assembly of cotton ESTs
JA Udall, JM Swanson, K Haller, RA Rapp, ME Sparks, J Hatfield, Y Yu, ...
Genome research 16 (3), 441-450, 2006
1912006
Quantitative trait loci for resistance to Sclerotinia sclerotiorum and its association with a homeologous non-reciprocal transposition in Brassica napus L.
J Zhao, JA Udall, PA Quijada, CR Grau, J Meng, TC Osborn
Theoretical and Applied Genetics 112, 509-516, 2006
1892006
Quantitative trait analysis of seed yield and other complex traits in hybrid spring rapeseed (Brassica napus L.): 2. Identification of alleles from unadapted germplasm
JA Udall, PA Quijada, B Lambert, TC Osborn
Theoretical and Applied Genetics 113, 597-609, 2006
1762006
Partitioned expression of duplicated genes during development and evolution of a single cell in a polyploid plant
R Hovav, JA Udall, B Chaudhary, R Rapp, L Flagel, JF Wendel
Proceedings of the National Academy of Sciences 105 (16), 6191-6195, 2008
1732008
Development and mapping of SNP assays in allotetraploid cotton
RL Byers, DB Harker, SM Yourstone, PJ Maughan, JA Udall
Theoretical and Applied Genetics 124, 1201-1214, 2012
1652012
Homoeologous nonreciprocal recombination in polyploid cotton
A Salmon, L Flagel, B Ying, JA Udall, JF Wendel
New Phytologist 186 (1), 123-134, 2010
1542010
Two gap-free reference genomes and a global view of the centromere architecture in rice
JM Song, WZ Xie, S Wang, YX Guo, DH Koo, D Kudrna, C Gong, Y Huang, ...
Molecular Plant 14 (10), 1757-1767, 2021
1432021
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