| Distance measures for effective clustering of ARIMA time-series K Kalpakis, D Gada, V Puttagunta Proceedings 2001 IEEE international conference on data mining, 273-280, 2001 | 683 | 2001 |
| The transcription factors Snail and Slug activate the transforming growth factor-beta signaling pathway in breast cancer A Dhasarathy, D Phadke, D Mav, RR Shah, PA Wade PloS one 6 (10), e26514, 2011 | 214 | 2011 |
| DNA methylation profiling in human B cells reveals immune regulatory elements and epigenetic plasticity at Alu elements during B-cell activation AY Lai, D Mav, R Shah, SA Grimm, D Phadke, K Hatzi, A Melnick, ... Genome research 23 (12), 2030-2041, 2013 | 107 | 2013 |
| RNA-Seq profiling reveals novel hepatic gene expression pattern in aflatoxin B1 treated rats BA Merrick, DP Phadke, SS Auerbach, D Mav, SM Stiegelmeyer, ... PloS one 8 (4), e61768, 2013 | 70 | 2013 |
| Evaluation of 5-day In Vivo Rat Liver and Kidney With High-throughput Transcriptomics for Estimating Benchmark Doses of Apical Outcomes WM Gwinn, SS Auerbach, F Parham, MD Stout, S Waidyanatha, E Mutlu, ... Toxicological Sciences 176 (2), 343-354, 2020 | 50 | 2020 |
| Analysis of chromatin dynamics during glucocorticoid receptor activation CJ Burd, JM Ward, VJ Crusselle-Davis, GE Kissling, D Phadke, RR Shah, ... Molecular and Cellular Biology 32 (10), 1805-1817, 2012 | 40 | 2012 |
| RNA‐Seq‐based toxicogenomic assessment of fresh frozen and formalin‐fixed tissues yields similar mechanistic insights SS Auerbach, DP Phadke, D Mav, S Holmgren, Y Gao, B Xie, JH Shin, ... Journal of Applied Toxicology 35 (7), 766-780, 2015 | 28 | 2015 |
| Arsenite malignantly transforms human prostate epithelial cells in vitro by gene amplification of mutated KRAS BA Merrick, DP Phadke, MA Bostrom, RR Shah, GM Wright, X Wang, ... PLoS One 14 (4), e0215504, 2019 | 21 | 2019 |
| Transcriptional pathways linked to fetal and maternal hepatic dysfunction caused by gestational exposure to perfluorooctanoic acid (PFOA) or hexafluoropropylene oxide-dimer … BE Blake, CN Miller, H Nguyen, VA Chappell, TP Phan, DP Phadke, ... Ecotoxicology and environmental safety 248, 114314, 2022 | 19 | 2022 |
| HAfTs are novel lncRNA transcripts from aflatoxin exposure BA Merrick, JS Chang, DP Phadke, MA Bostrom, RR Shah, X Wang, ... PLoS One 13 (1), e0190992, 2018 | 9 | 2018 |
| KRAS-retroviral fusion transcripts and gene amplification in arsenic-transformed, human prostate CAsE-PE cancer cells BA Merrick, DP Phadke, MA Bostrom, RR Shah, GM Wright, X Wang, ... Toxicology and applied pharmacology 397, 115017, 2020 | 8 | 2020 |
| Whole exome sequencing in the rat JF Foley, DP Phadke, O Hardy, S Hardy, V Miller, A Madan, K Howard, ... BMC genomics 19, 1-14, 2018 | 8 | 2018 |
| Exome sequencing of fresh-frozen or formalin-fixed paraffin-embedded B6C3F1/N mouse hepatocellular carcinomas arising either spontaneously or due to chronic chemical exposure SS Auerbach, M Xu, BA Merrick, MJ Hoenerhoff, D Phadke, DJ Taxman, ... Toxicologic pathology 46 (6), 706-718, 2018 | 8 | 2018 |
| A role for BRG1 in the regulation of genes required for development of the lymphatic system AP Singh, J Foley, A Tandon, D Phadke, HK Kinyamu, TK Archer Oncotarget 8 (33), 54925, 2017 | 8 | 2017 |
| Fast and effective wireless handoff scheme using forwarding pointers and hierarchical foreign agents S Avancha, D Chakraborty, D Gada, T Kamdar, A Joshi Modeling and Design of Wireless Networks 4531, 258-268, 2001 | 8 | 2001 |
| Utility of extrapolating human S1500+ genes to the whole transcriptome: tunicamycin case study D Mav, DP Phadke, MR Balik-Meisner, BA Merrick, S Auerbach, ... Bioinformatics and biology insights 14, 1177932220952742, 2020 | 7 | 2020 |
| Development of a zebrafish s1500+ sentinel gene set for high-throughput transcriptomics MR Balik-Meisner, D Mav, DP Phadke, LJ Everett, RR Shah, T Tal, ... Zebrafish 16 (4), 331-347, 2019 | 5 | 2019 |
| Inhibition of the ubiquitin proteasome system differentially regulates glucocorticoid receptor-mediated transcriptional processes KR Wiggins, V Davis, D Phadke, R Shah, TK Archer Cancer Research 72 (8_Supplement), 3928-3928, 2012 | 5 | 2012 |
| Statistical approach to feature extraction for numeral recognition from degraded documents V Vaidya, V Deshpande, D Gada, B Shirole Proceedings of the Fifth International Conference on Document Analysis and …, 1999 | 5 | 1999 |
| Impact of aligner, normalization method, and sequencing depth on TempO-seq accuracy LJ Everett, D Mav, DP Phadke, MR Balik-Meisner, RR Shah Bioinformatics and Biology Insights 16, 11779322221095216, 2022 | 3 | 2022 |
