Qin Ma
Qin Ma
Associate Professor, Ohio State University
Verified email at osu.edu - Homepage
Title
Cited by
Cited by
Year
QUBIC: a qualitative biclustering algorithm for analyses of gene expression data
G Li, Q Ma, H Tang, AH Paterson, Y Xu
Nucleic acids research 37 (15), e101-e101, 2009
2412009
DOOR 2.0: presenting operons and their functions through dynamic and integrated views
X Mao, Q Ma, C Zhou, X Chen, H Zhang, J Yang, F Mao, W Lai, Y Xu
Nucleic acids research 42 (D1), D654-D659, 2014
1522014
Caldicellulosiruptor core and pan genomes reveal determinants for non-cellulosomal thermophilic deconstruction of plant biomass
SE Blumer-Schuette, RJ Giannone, JV Zurawski, I Ozdemir, Q Ma, Y Yin, ...
Journal of Bacteriology, 2012
1042012
The understanding of circular RNAs as special triggers in carcinogenesis
Z Xin, Q Ma, S Ren, G Wang, F Li
Briefings in functional genomics 16 (2), 80-86, 2017
532017
Comprehensive characterization of the genomic alterations in human gastric cancer
J Cui, Y Yin, Q Ma, G Wang, V Olman, Y Zhang, WC Chou, CS Hong, ...
International journal of cancer 137 (1), 86-95, 2015
532015
Genome-scale identification of cell-wall related genes in Arabidopsis based on co-expression network analysis
S Wang, Y Yin, Q Ma, X Tang, D Hao, Y Xu
BMC Plant Biology 12 (1), 138, 2012
442012
DMINDA 2.0: integrated and systematic views of regulatory DNA motif identification and analyses
J Yang, X Chen, A McDermaid, Q Ma
Bioinformatics 33 (16), 2586-2588, 2017
432017
QUBIC: a bioconductor package for qualitative biclustering analysis of gene co-expression data
Y Zhang, J Xie, J Yang, A Fennell, C Zhang, Q Ma
Bioinformatics 33 (3), 450-452, 2017
432017
Protein–protein interaction sites prediction by ensemble random forests with synthetic minority oversampling technique
X Wang, B Yu, A Ma, C Chen, B Liu, Q Ma
Bioinformatics, 2019
422019
DMINDA: an integrated web server for DNA motif identification and analyses
Q Ma, H Zhang, X Mao, C Zhou, B Liu, X Chen, Y Xu
Nucleic acids research 42 (W1), W12-W19, 2014
382014
Clostridium thermocellum transcriptomic profiles after exposure to furfural or heat stress
CM Wilson, S Yang, M Rodriguez, Q Ma, CM Johnson, L Dice, Y Xu, ...
Biotechnology for biofuels 6 (1), 131, 2013
382013
A new framework for identifying cis-regulatory motifs in prokaryotes
G Li, B Liu, Q Ma, Y Xu
Nucleic acids research 39 (7), e42-e42, 2011
382011
UbiSitePred: A novel method for improving the accuracy of ubiquitination sites prediction by using LASSO to select the optimal Chou's pseudo components
X Cui, Z Yu, B Yu, M Wang, B Tian, Q Ma
Chemometrics and Intelligent Laboratory Systems 184, 28-43, 2019
352019
SubMito-XGBoost: predicting protein submitochondrial localization by fusing multiple feature information and eXtreme gradient boosting
B Yu, W Qiu, C Chen, A Ma, J Jiang, H Zhou, Q Ma
Bioinformatics 36 (4), 1074-1081, 2020
342020
Predicting protein–protein interactions by fusing various Chou's pseudo components and using wavelet denoising approach
B Tian, X Wu, C Chen, W Qiu, Q Ma, B Yu
Journal of Theoretical Biology 462, 329-346, 2019
342019
An integrated toolkit for accurate prediction and analysis of cis-regulatory motifs at a genome scale
Q Ma, B Liu, C Zhou, Y Yin, G Li, Y Xu
Bioinformatics 29 (18), 2261-2268, 2013
342013
LightGBM-PPI: Predicting protein-protein interactions through LightGBM with multi-information fusion
C Chen, Q Zhang, Q Ma, B Yu
Chemometrics and Intelligent Laboratory Systems 191, 54-64, 2019
332019
Predicting drug-target interactions using Lasso with random forest based on evolutionary information and chemical structure
H Shi, S Liu, J Chen, X Li, Q Ma, B Yu
Genomics 111 (6), 1839-1852, 2019
322019
Gene Regulatory Networks for Lignin Biosynthesis in Switchgrass (Panicum virgatum)
X Rao, X Chen, H Shen, Q Ma, G Li, Y Tang, M Pena, W York, TP Frazier, ...
Plant Biotechnology Journal, 2018
282018
LncFinder: an integrated platform for long non-coding RNA identification utilizing sequence intrinsic composition, structural information and physicochemical property
S Han, Y Liang, Q Ma, Y Xu, Y Zhang, W Du, C Wang, Y Li
Briefings in bioinformatics 20 (6), 2009-2027, 2019
272019
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