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Aleksey Porollo
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p62 is a key regulator of nutrient sensing in the mTORC1 pathway
A Duran, R Amanchy, JF Linares, J Joshi, S Abu-Baker, A Porollo, ...
Molecular cell 44 (1), 134-146, 2011
4762011
Prediction‐based fingerprints of protein–protein interactions
A Porollo, J Meller
Proteins: Structure, Function, and Bioinformatics 66 (3), 630-645, 2007
3812007
Combining prediction of secondary structure and solvent accessibility in proteins
R Adamczak, A Porollo, J Meller
Proteins: Structure, Function, and Bioinformatics 59 (3), 467-475, 2005
3802005
Accurate prediction of solvent accessibility using neural networks–based regression
R Adamczak, A Porollo, J Meller
Proteins: Structure, Function, and Bioinformatics 56 (4), 753-767, 2004
3242004
Granulocyte macrophage-colony stimulating factor induced Zn sequestration enhances macrophage superoxide and limits intracellular pathogen survival
KS Vignesh, JAL Figueroa, A Porollo, JA Caruso, GS Deepe Jr
Immunity 39 (4), 697-710, 2013
2152013
Control of nutrient stress-induced metabolic reprogramming by PKCζ in tumorigenesis
L Ma, Y Tao, A Duran, V Llado, A Galvez, JF Barger, EA Castilla, J Chen, ...
Cell 152 (3), 599-611, 2013
1682013
POLYVIEW: a flexible visualization tool for structural and functional annotations of proteins
AA Porollo, R Adamczak, J Meller
Bioinformatics 20 (15), 2460-2462, 2004
1672004
Effects of parabens on adipocyte differentiation
P Hu, X Chen, RJ Whitener, ET Boder, JO Jones, A Porollo, J Chen, ...
Toxicological sciences 131 (1), 56-70, 2013
1472013
Linear regression models for solvent accessibility prediction in proteins
M Wagner, R Adamczak, A Porollo, J Meller
Journal of Computational Biology 12 (3), 355-369, 2005
1282005
Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
A Porollo, J Meller
BMC bioinformatics 8 (1), 1-8, 2007
1222007
Enhanced recognition of protein transmembrane domains with prediction-based structural profiles
B Cao, A Porollo, R Adamczak, M Jarrell, J Meller
Bioinformatics 22 (3), 303-309, 2006
1142006
CYP63A2, a catalytically versatile fungal P450 monooxygenase capable of oxidizing higher-molecular-weight polycyclic aromatic hydrocarbons, alkylphenols, and alkanes
K Syed, A Porollo, YW Lam, PE Grimmett, JS Yadav
Applied and environmental microbiology 79 (8), 2692-2702, 2013
972013
Calpain-14 and its association with eosinophilic esophagitis
VA Litosh, M Rochman, JK Rymer, A Porollo, LC Kottyan, ME Rothenberg
Journal of Allergy and Clinical Immunology 139 (6), 1762-1771. e7, 2017
832017
Phenome-wide association study (PheWAS) in EMR-linked pediatric cohorts, genetically links PLCL1 to speech language development and IL5-IL13 to …
B Namjou, K Marsolo, RJ Caroll, JC Denny, MD Ritchie, SS Verma, ...
Frontiers in genetics 5, 401, 2014
802014
Transcriptome of Pneumocystis carinii during fulminate infection: carbohydrate metabolism and the concept of a compatible parasite
MT Cushion, AG Smulian, BE Slaven, T Sesterhenn, J Arnold, C Staben, ...
PLoS One 2 (5), e423, 2007
752007
Mitochondria-specific transgenic overexpression of connexin-43 simulates preconditioning-induced cytoprotection of stem cells
G Lu, HK Haider, A Porollo, M Ashraf
Cardiovascular research 88 (2), 277-286, 2010
612010
Survey of public domain software for docking simulations and virtual screening
J Biesiada, A Porollo, P Velayutham, M Kouril, J Meller
Human genomics 5 (5), 1-9, 2011
592011
A Fungal P450 (CYP5136A3) Capable of Oxidizing Polycyclic Aromatic Hydrocarbons and Endocrine Disrupting Alkylphenols: Role of Trp129 and Leu324
K Syed, A Porollo, YW Lam, JS Yadav
PloS one 6 (12), e28286, 2011
552011
An XRCC4 Splice Mutation Associated With Severe Short Stature, Gonadal Failure, and Early-Onset Metabolic Syndrome
C de Bruin, V Mericq, SF Andrew, HA van Duyvenvoorde, NS Verkaik, ...
The Journal of Clinical Endocrinology & Metabolism 100 (5), E789-E798, 2015
542015
CoeViz: a web-based tool for coevolution analysis of protein residues
FN Baker, A Porollo
BMC bioinformatics 17 (1), 1-7, 2016
432016
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Articles 1–20