|Exploiting biological priors and sequence variants enhances QTL discovery and genomic prediction of complex traits|
IM MacLeod, PJ Bowman, CJ Vander Jagt, M Haile-Mariam, KE Kemper, ...
BMC genomics 17 (1), 1-21, 2016
|Toward genomic prediction from whole-genome sequence data: impact of sequencing design on genotype imputation and accuracy of predictions|
T Druet, IM Macleod, BJ Hayes
Heredity 112 (1), 39-47, 2014
|A genome map of divergent artificial selection between Bos taurus dairy cattle and Bos taurus beef cattle|
BJ Hayes, AJ Chamberlain, S Maceachern, K Savin, H McPartlan, ...
Animal genetics 40 (2), 176-184, 2009
|Genetics of complex traits: prediction of phenotype, identification of causal polymorphisms and genetic architecture|
ME Goddard, KE Kemper, IM MacLeod, AJ Chamberlain, BJ Hayes
Proceedings of the Royal Society B: Biological Sciences 283 (1835), 20160569, 2016
|Accuracy of marker-assisted selection with single markers and marker haplotypes in cattle|
BJ Hayes, AJ Chamberlain, H McPartlan, I Macleod, L Sethuraman, ...
Genetics Research 89 (4), 215-220, 2007
|Evaluation of the accuracy of imputed sequence variant genotypes and their utility for causal variant detection in cattle|
H Pausch, IM MacLeod, R Fries, R Emmerling, PJ Bowman, ...
Genetics Selection Evolution 49 (1), 1-14, 2017
|Inferring demography from runs of homozygosity in whole-genome sequence, with correction for sequence errors|
IM MacLeod, DM Larkin, HA Lewin, BJ Hayes, ME Goddard
Molecular biology and evolution 30 (9), 2209-2223, 2013
|Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle|
DM Larkin, HD Daetwyler, AG Hernandez, CL Wright, LA Hetrick, ...
Proceedings of the National Academy of Sciences 109 (20), 7693-7698, 2012
|Quantifying the contribution of sequence variants with regulatory and evolutionary significance to 34 bovine complex traits|
R Xiang, I Berg, IM MacLeod, BJ Hayes, CP Prowse-Wilkins, M Wang, ...
Proceedings of the National Academy of Sciences 116 (39), 19398-19408, 2019
|Genomic prediction from whole genome sequence in livestock: the 1000 bull genomes project|
BJ Hayes, IM MacLeod, HD Daetwyler, PJ Bowman, AJ Chamberlian, ...
10. World Congress of Genetics Applied to Livestock Production, np, 2014
|The effects of demography and long-term selection on the accuracy of genomic prediction with sequence data|
IM MacLeod, BJ Hayes, ME Goddard
Genetics 198 (4), 1671-1684, 2014
|Population structure and history of the Welsh sheep breeds determined by whole genome genotyping|
SE Beynon, GT Slavov, M Farré, B Sunduimijid, K Waddams, B Davies, ...
BMC genetics 16 (1), 1-15, 2015
|Nutrition during fetal life alters annual wool production and quality in young Merino sheep|
RW Kelly, I Macleod, P Hynd, J Greeff
Australian Journal of Experimental Agriculture 36 (3), 259-267, 1996
|A novel predictor of multilocus haplotype homozygosity: comparison with existing predictors|
IM MacLeod, BJ Hayes, ME Goddard
Genetics research 91 (6), 413-426, 2009
|Genomic prediction based on selected variants from imputed whole-genome sequence data in Australian sheep populations|
N Moghaddar, M Khansefid, JHJ van der Werf, S Bolormaa, N Duijvesteijn, ...
Genetics Selection Evolution 51 (1), 1-14, 2019
|Power of a genome scan to detect and locate quantitative trait loci in cattle using dense single nucleotide polymorphisms|
IM MacLeod, BJ Hayes, KW Savin, AJ Chamberlain, HC McPartlan, ...
Journal of Animal Breeding and Genetics 127 (2), 133-142, 2010
|Lifetime changes in wool production of Merino sheep following differential feeding in fetal and early life|
RW Kelly, JC Greeff, I Macleod
Australian Journal of Agricultural Research 57 (8), 867-876, 2006
|Genome-wide fine-mapping identifies pleiotropic and functional variants that predict many traits across global cattle populations|
R Xiang, IM MacLeod, HD Daetwyler, G de Jong, E O’Connor, ...
Nature communications 12 (1), 1-13, 2021
|Accuracy of imputation to whole-genome sequence in sheep|
S Bolormaa, AJ Chamberlain, M Khansefid, P Stothard, AA Swan, ...
Genetics Selection Evolution 51 (1), 1-17, 2019
|Genome-wide comparative analyses of correlated and uncorrelated phenotypes identify major pleiotropic variants in dairy cattle|
R Xiang, IM MacLeod, S Bolormaa, ME Goddard
Scientific reports 7 (1), 1-12, 2017