| Label-free quantitative phosphoproteomics with novel pairwise abundance normalization reveals synergistic RAS and CIP2A signaling O Kauko, TD Laajala, M Jumppanen, P Hintsanen, V Suni, P Haapaniemi, ... Scientific reports 5 (1), 1-17, 2015 | 61 | 2015 |
| Phosphoproteome and drug-response effects mediated by the three protein phosphatase 2A inhibitor proteins CIP2A, SET, and PME-1 O Kauko, SY Imanishi, E Kulesskiy, L Yetukuri, TD Laajala, M Sharma, ... Journal of Biological Chemistry 295 (13), 4194-4211, 2020 | 58 | 2020 |
| Confident site localization using a simulated phosphopeptide spectral library V Suni, SY Imanishi, A Maiolica, R Aebersold, GL Corthals Journal of proteome research 14 (5), 2348-2359, 2015 | 33 | 2015 |
| Community Assessment of the Predictability of Cancer Protein and Phosphoprotein Levels from Genomics and Transcriptomics M Yang, F Petralia, Z Li, H Li, W Ma, X Song, S Kim, H Lee, H Yu, B Lee, ... Cell Systems 11 (2), 186-195. e9, 2020 | 22 | 2020 |
| Rules for PP2A-controlled phosphosignalling and drug responses O Kauko, SY Imanishi, E Kulesskiy, TD Laajala, L Yetukuri, A Laine, ... bioRxiv, 271841, 2018 | 14 | 2018 |
| Early DNA methylation changes in children developing beta cell autoimmunity at a young age I Starskaia, E Laajala, T Grönroos, T Härkönen, S Junttila, R Kattelus, ... Diabetologia, 1-17, 2022 | 10 | 2022 |
| SimPhospho: a software tool enabling confident phosphosite assignment V Suni, T Suomi, T Tsubosaka, SY Imanishi, LL Elo, GL Corthals Bioinformatics 34 (15), 2690-2692, 2018 | 9 | 2018 |
| Enrichment and sequencing of phosphopeptides on indium tin oxide coated glass slides P Kouvonen, EM Rainio, V Suni, P Koskinen, GL Corthals Molecular BioSystems 7 (6), 1828-1837, 2011 | 9 | 2011 |
| Optimization of TripleTOF spectral simulation and library searching for confident localization of phosphorylation sites A Takai, T Tsubosaka, Y Hirano, N Hayakawa, F Tani, P Haapaniemi, ... PloS one 14 (12), e0225885, 2019 | 5 | 2019 |
| Nutrition factors associated with rib stress injury history in elite rowers B Lundy, V Suni, M Drew, L Trease, LM Burke Journal of Science and Medicine in Sport 25 (12), 979-985, 2022 | 3 | 2022 |
| Data combination from multiple matrix‐assisted laser desorption/ionization (MALDI) matrices: opportunities and limitations for MALDI analysis P Kouvonen, EM Rainio, V Suni, P Koskinen, GL Corthals Rapid Communications in Mass Spectrometry 24 (23), 3493-3495, 2010 | 3 | 2010 |
| Reproducibility-optimized detection of differential DNA methylation V Suni, F Seyednasrollah, B Ghimire, S Junttila, A Laiho, LL Elo Epigenomics 12 (9), 747-755, 2020 | 1 | 2020 |
| Systemic map of protein phosphatase 2A (PP2A)-regulated phosphotargets and drug responses in cancer cells O Kauko, S Imanishi, E Kulesskiy, TD Laajala, L Yetukuri, A Padzik, ... Cancer Research 77 (13 Supplement), 5560-5560, 2017 | 1 | 2017 |
