Ben van Werkhoven

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Jason MaassenNetherlands eScience CenterVerified email at esciencecenter.nl
Henri BalVU University AmsterdamVerified email at cs.vu.nl
Niels DrostProgramme Manager, Netherlands eScience CenterVerified email at esciencecenter.nl
F.I. PelupessyNetherlands eScience CenterVerified email at esciencecenter.nl
Henk DijkstraIMAU, Utrecht UniversityVerified email at uu.nl
Gijs van den OordNetherlands eScience CenterVerified email at esciencecenter.nl
Rob V. van NieuwpoortFull professor at Leiden University, The NetherlandsVerified email at liacs.leidenuniv.nl
Alessio ScloccoNetherlands eScience CenterVerified email at sclocco.eu
Stijn HeldensResearch Software Engineer at Netherlands eScience Center (NLeSc)/University of AmsterdamVerified email at esciencecenter.nl
Rolf Hutassociate professor at Delft University of TechnologyVerified email at tudelft.nl
Peter KalverlaWageningen UniversityVerified email at wur.nl
Simon Portegies ZwartProfessor of computational astrophysics, Sterrewacht LeidenVerified email at strw.leidenuniv.nl
Nick van de GiesenDelft University of TechnologyVerified email at tudelft.nl
Bernd RiegerProfessor, TU DelftVerified email at tudelft.nl
Simon HettrickThe Software Sustainability InstituteVerified email at software.ac.uk
Floris-Jan WillemsenPhD student, Leiden University & Netherlands eScience CenterVerified email at liacs.leidenuniv.nl
Richard SchoonhovenAssistant Professor, Amsterdam UMC, PathologyVerified email at amsterdamumc.nl
Daniel S. KatzNCSA, CS, ECE, iSchool @ UIUCVerified email at illinois.edu
Stephan DruskatSoftware Engineering Researcher & Research Software Engineer; German Aerospace Center (DLRVerified email at dlr.de
Kees Joost BatenburgProfessor of Imaging and VisualizationVerified email at liacs.leidenuniv.nl

Ben van Werkhoven

Leiden University, Netherlands eScience Center

Verified email at liacs.leidenuniv.nl - Homepage

Computer Science GPU Computing auto-tuning optimization research software engineering


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FAIR principles for research software (FAIR4RS principles) NP Chue Hong, DS Katz, M Barker, AL Lamprecht, C Martinez, ... Zenodo, 2022	121	2022
Performance models for CPU-GPU data transfers B van Werkhoven, J Maassen, FJ Seinstra, HE Bal 14th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing …, 2014	101	2014
Kernel Tuner: A search-optimizing GPU code auto-tuner B van Werkhoven Future Generation Computer Systems 90, 347-358, 2019	89	2019
Jungle computing: Distributed supercomputing beyond clusters, grids, and clouds FJ Seinstra, J Maassen, RV Van Nieuwpoort, N Drost, T Van Kessel, ... Grids, Clouds and Virtualization, 167-197, 2011	70	2011
The Landscape of Exascale Research: A Data-Driven Literature Analysis S Heldens, P Hijma, B van Werkhoven, J Maassen, ASZ Belloum, ... ACM Computing Surveys (CSUR) 53 (2), 1-43, 2020	68	2020
Template-free 2D particle fusion in localization microscopy H Heydarian, F Schueder, MT Strauss, B Van Werkhoven, M Fazel, ... Nature methods 15 (10), 781-784, 2018	68	2018
Optimization techniques for GPU programming P Hijma, S Heldens, A Sclocco, B Van Werkhoven, HE Bal ACM Computing Surveys 55 (11), 1-81, 2023	57	2023
Optimizing convolution operations on GPUs using adaptive tiling B van Werkhoven, J Maassen, HE Bal, FJ Seinstra Future Generation Computer Systems 30, 14-26, 2014	51	2014
3D particle averaging and detection of macromolecular symmetry in localization microscopy H Heydarian, M Joosten, A Przybylski, F Schueder, R Jungmann, ... Nature communications 12 (1), 2847, 2021	42*	2021
A distributed computing approach to improve the performance of the Parallel Ocean Program (v2. 1) B van Werkhoven, J Maassen, M Kliphuis, HA Dijkstra, SE Brunnabend, ... Geoscientific Model Development 7 (1), 267-281, 2014	25	2014
The eWaterCycle platform for open and FAIR hydrological collaboration R Hut, N Drost, N van de Giesen, B van Werkhoven, B Abdollahi, J Aerts, ... Geoscientific Model Development 15 (13), 5371-5390, 2022	23*	2022
Bayesian Optimization for auto-tuning GPU kernels FJ Willemsen, R van Nieuwpoort, B van Werkhoven 2021 International Workshop on Performance Modeling, Benchmarking and …, 2021	21	2021
litstudy: A Python package for literature reviews S Heldens, A Sclocco, H Dreuning, B van Werkhoven, P Hijma, ... SoftwareX 20, 101207, 2022	20	2022
Clustering image noise patterns by embedding and visualization for common source camera detection S Georgievska, R Bakhshi, A Gavai, A Sclocco, B van Werkhoven Digital Investigation 23, 22-30, 2017	18	2017
Changes in extreme regional sea surface height due to an abrupt weakening of the Atlantic meridional overturning circulation SE Brunnabend, HA Dijkstra, MA Kliphuis, B van Werkhoven, HE Bal, ... Ocean Science 10 (6), 881-891, 2014	17	2014
The oceanographic multipurpose software environment (OMUSE v1. 0) I Pelupessy, B Van Werkhoven, A Van Elteren, J Viebahn, A Candy, ... Geoscientific Model Development 10 (8), 3167-3187, 2017	16*	2017
AMBER: a real-time pipeline for the detection of single pulse astronomical transients A Sclocco, S Heldens, B van Werkhoven SoftwareX 12, 100549, 2020	13	2020
Lessons learned in a decade of research software engineering gpu applications B van Werkhoven, WJ Palenstijn, A Sclocco International Conference on Computational Science, 399-412, 2020	13	2020
Raising the profile of research software: Recommendations for funding agencies and research institutions A Akhmerov, M Cruz, N Drost, C Hof, T Knapen, M Kuzak, ... NWO (The Netherlands Organisation for Scientific Research), 2019	13*	2019
softwaresaved/international-survey: Public release for 2018 results (Version 2018-v. 1.0. 2) O Philippe, M Hammitzsch, S Janosch, A van der Walt, B van Werkhoven, ... March, 2019	11*	2019

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