| Single-cell mRNA quantification and differential analysis with Census X Qiu, A Hill, J Packer, D Lin, YA Ma, C Trapnell Nature methods 14 (3), 309-315, 2017 | 1271 | 2017 |
| Comprehensive single-cell transcriptional profiling of a multicellular organism J Cao, JS Packer, V Ramani, DA Cusanovich, C Huynh, R Daza, X Qiu, ... Science 357 (6352), 661-667, 2017 | 1261 | 2017 |
| Joint profiling of chromatin accessibility and gene expression in thousands of single cells J Cao, DA Cusanovich, V Ramani, D Aghamirzaie, HA Pliner, AJ Hill, ... Science 361 (6409), 1380-1385, 2018 | 748 | 2018 |
| A Protein-Truncating HSD17B13 Variant and Protection from Chronic Liver Disease NS Abul-Husn, X Cheng, AH Li, Y Xin, C Schurmann, P Stevis, Y Liu, ... New England Journal of Medicine 378 (12), 1096-1106, 2018 | 680 | 2018 |
| Cicero predicts cis-regulatory DNA interactions from single-cell chromatin accessibility data HA Pliner, JS Packer, JL McFaline-Figueroa, DA Cusanovich, RM Daza, ... Molecular cell 71 (5), 858-871. e8, 2018 | 586 | 2018 |
| Distribution and clinical impact of functional variants in 50,726 whole-exome sequences from the DiscovEHR study FE Dewey, MF Murray, JD Overton, L Habegger, JB Leader, SN Fetterolf, ... Science 354 (6319), aaf6814, 2016 | 552 | 2016 |
| A lineage-resolved molecular atlas of C. elegans embryogenesis at single-cell resolution JS Packer, Q Zhu, C Huynh, P Sivaramakrishnan, E Preston, H Dueck, ... Science 365 (6459), eaax1971, 2019 | 397 | 2019 |
| Massively multiplex chemical transcriptomics at single-cell resolution SR Srivatsan, JL McFaline-Figueroa, V Ramani, L Saunders, J Cao, ... Science 367 (6473), 45-51, 2020 | 242 | 2020 |
| On the design of CRISPR-based single-cell molecular screens AJ Hill, JL McFaline-Figueroa, LM Starita, MJ Gasperini, KA Matreyek, ... Nature methods 15 (4), 271-274, 2018 | 181 | 2018 |
| Embryo-scale, single-cell spatial transcriptomics SR Srivatsan, MC Regier, E Barkan, JM Franks, JS Packer, P Grosjean, ... Science 373 (6550), 111-117, 2021 | 163 | 2021 |
| Thyroid hormone regulates distinct paths to maturation in pigment cell lineages LM Saunders, AK Mishra, AJ Aman, VM Lewis, MB Toomey, JS Packer, ... Elife 8, e45181, 2019 | 106 | 2019 |
| Single-cell multi-omics: an engine for new quantitative models of gene regulation J Packer, C Trapnell Trends in Genetics 34 (9), 653-665, 2018 | 101 | 2018 |
| CLAMMS: a scalable algorithm for calling common and rare copy number variants from exome sequencing data JS Packer, EK Maxwell, C O’Dushlaine, AE Lopez, FE Dewey, ... Bioinformatics 32 (1), 133-135, 2016 | 100 | 2016 |
| Chromatin accessibility dynamics of myogenesis at single cell resolution HA Pliner, J Packer, JL McFaline-Figueroa, DA Cusanovich, R Daza, ... BioRxiv, 155473, 2017 | 20 | 2017 |
| Methods and systems for copy number variant detection J Reid, L Habegger, J Packer, E Maxwell US Patent 10,395,759, 2019 | 4 | 2019 |
| Dystrophin deficiency impairs cell junction formation during embryonic myogenesis E Mozin, E Massouridès, V Mournetas, C Lièvre, A Bourdon, DL Jackson, ... bioRxiv, 2023.12. 05.569919, 2023 | | 2023 |
| Single cell developmental trajectories reveal early phenotypes in Duchenne muscular dystrophy prior to skeletal muscle commitment JB Dupont, SM Luttrell, D Jackson, JS Packer, L Maves, C Trapnell, ... HUMAN GENE THERAPY 30 (11), A123-A123, 2019 | | 2019 |
| A molecular atlas of C. elegans development at single-cell and single-lineage resolution JS Packer | | 2019 |
