Katia Koelle
Katia Koelle
Associate Professor of Biology, Emory University
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Epochal evolution shapes the phylodynamics of interpandemic influenza A (H3N2) in humans
K Koelle, S Cobey, B Grenfell, M Pascual
Science 314 (5807), 1898-1903, 2006
Refractory periods and climate forcing in cholera dynamics
K Koelle, X Rodó, M Pascual, M Yunus, G Mostafa
Nature 436 (7051), 696-700, 2005
Viral phylodynamics
EM Volz, K Koelle, T Bedford
PLoS computational biology 9 (3), e1002947, 2013
Global patterns in seasonal activity of influenza A/H3N2, A/H1N1, and B from 1997 to 2005: viral coexistence and latitudinal gradients
BS Finkelman, C Viboud, K Koelle, MJ Ferrari, N Bharti, BT Grenfell
PloS one 2 (12), e1296, 2007
Decreases in dengue transmission may act to increase the incidence of dengue hemorrhagic fever
Y Nagao, K Koelle
Proceedings of the National Academy of Sciences 105 (6), 2238-2243, 2008
Shifting patterns: malaria dynamics and rainfall variability in an African highland
M Pascual, B Cazelles, MJ Bouma, LF Chaves, K Koelle
Proceedings of the Royal Society B: Biological Sciences 275 (1631), 123-132, 2008
Disentangling extrinsic from intrinsic factors in disease dynamics: a nonlinear time series approach with an application to cholera
K Koelle, M Pascual
The American Naturalist 163 (6), 901-913, 2004
The long-term safety, public health impact, and cost-effectiveness of routine vaccination with a recombinant, live-attenuated dengue vaccine (Dengvaxia): a model comparison study
S Flasche, M Jit, I Rodríguez-Barraquer, L Coudeville, M Recker, K Koelle, ...
PLoS medicine 13 (11), e1002181, 2016
Inference for nonlinear epidemiological models using genealogies and time series
DA Rasmussen, O Ratmann, K Koelle
PLoS computational biology 7 (8), e1002136, 2011
Pathogen adaptation to seasonal forcing and climate change
K Koelle, M Pascual, M Yunus
Proceedings of the Royal Society B: Biological Sciences 272 (1566), 971-977, 2005
Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel
D Miller, MA Martin, N Harel, O Tirosh, T Kustin, M Meir, N Sorek, ...
Nature communications 11 (1), 1-10, 2020
Dispersal‐induced desynchronization: from metapopulations to metacommunities
K Koelle, J Vandermeer
Ecology Letters 8 (2), 167-175, 2005
Phylodynamic inference for structured epidemiological models
DA Rasmussen, EM Volz, K Koelle
PLoS computational biology 10 (4), e1003570, 2014
Transmission bottleneck size estimation from pathogen deep-sequencing data, with an application to human influenza A virus
A Sobel Leonard, DB Weissman, B Greenbaum, E Ghedin, K Koelle
Journal of virology 91 (14), e00171-17, 2017
Deep sequencing of influenza A virus from a human challenge study reveals a selective bottleneck and only limited intrahost genetic diversification
A Sobel Leonard, MT McClain, GJD Smith, DE Wentworth, RA Halpin, ...
Journal of virology 90 (24), 11247-11258, 2016
Live attenuated HIV vaccines: predicting the tradeoff between efficacy and safety
SM Blower, K Koelle, DE Kirschner, J Mills
Proceedings of the National Academy of Sciences 98 (6), 3618-3623, 2001
The effects of host contact network structure on pathogen diversity and strain structure
COF Buckee, K Koelle, MJ Mustard, S Gupta
Proceedings of the National Academy of Sciences 101 (29), 10839-10844, 2004
Minimal within-host dengue models highlight the specific roles of the immune response in primary and secondary dengue infections
R Ben-Shachar, K Koelle
Journal of the Royal Society Interface 12 (103), 20140886, 2015
Impact of cross-protective vaccines on epidemiological and evolutionary dynamics of influenza
N Arinaminpathy, O Ratmann, K Koelle, SL Epstein, GE Price, C Viboud, ...
Proceedings of the National Academy of Sciences 109 (8), 3173-3177, 2012
The effects of a deleterious mutation load on patterns of influenza A/H3N2's antigenic evolution in humans
K Koelle, DA Rasmussen
Elife 4, e07361, 2015
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