Ole Winther
Ole Winther
Biology, Univ of Copenhagen, Genomic Medicine, Rigshospitalet and Technical University of Denmark
Verified email at bio.ku.dk - Homepage
Title
Cited by
Cited by
Year
Autoencoding beyond pixels using a learned similarity metric
ABL Larsen, SK Sønderby, H Larochelle, O Winther
International conference on machine learning, 1558-1566, 2016
12132016
SignalP 5.0 improves signal peptide predictions using deep neural networks
JJA Armenteros, KD Tsirigos, CK Sønderby, TN Petersen, O Winther, ...
Nature biotechnology 37 (4), 420-423, 2019
8972019
JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update
JC Bryne, E Valen, MHE Tang, T Marstrand, O Winther, I da Piedade, ...
Nucleic acids research 36 (suppl_1), D102-D106, 2007
7612007
Ladder variational autoencoders
CK Sønderby, T Raiko, L Maaløe, SK Sønderby, O Winther
arXiv preprint arXiv:1602.02282, 2016
539*2016
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
H Suzuki, ARR Forrest, E Van Nimwegen, CO Daub, PJ Balwierz, ...
Nature genetics 41 (5), 553, 2009
3492009
DeepLoc: prediction of protein subcellular localization using deep learning
JJ Almagro Armenteros, CK Sønderby, SK Sønderby, H Nielsen, ...
Bioinformatics 33 (21), 3387-3395, 2017
3422017
Auxiliary deep generative models
L Maaløe, CK Sønderby, SK Sønderby, O Winther
International conference on machine learning, 1445-1453, 2016
3372016
Gaussian processes for classification: Mean-field algorithms
M Opper, O Winther
Neural computation 12 (11), 2655-2684, 2000
3082000
Sequential neural models with stochastic layers
M Fraccaro, SK Sønderby, U Paquet, O Winther
arXiv preprint arXiv:1605.07571, 2016
2352016
Growth-rate regulated genes have profound impact on interpretation of transcriptome profiling in Saccharomyces cerevisiae
B Regenberg, T Grotkjær, O Winther, A Fausbøll, M Åkesson, C Bro, ...
Genome biology 7 (11), 1-13, 2006
2292006
Bayesian non-negative matrix factorization
MN Schmidt, O Winther, LK Hansen
International Conference on Independent Component Analysis and Signal …, 2009
2262009
Expectation Consistent Approximate Inference.
M Opper, O Winther, MJ Jordan
Journal of Machine Learning Research 6 (12), 2005
2212005
A Bayesian approach to on-line learning
M Opper, O Winther
On-line learning in neural networks, 363-378, 1998
2121998
Mean-field approaches to independent component analysis
PAFR Højen-Sørensen, O Winther, LK Hansen
Neural Computation 14 (4), 889-918, 2002
1982002
RSK is a principal effector of the RAS-ERK pathway for eliciting a coordinate promotile/invasive gene program and phenotype in epithelial cells
U Doehn, C Hauge, SR Frank, CJ Jensen, K Duda, JV Nielsen, ...
Molecular cell 35 (4), 511-522, 2009
1922009
BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis
FO Bagger, D Sasivarevic, SH Sohi, LG Laursen, S Pundhir, CK Sønderby, ...
Nucleic acids research 44 (D1), D917-D924, 2016
1762016
Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE
E Valen, G Pascarella, A Chalk, N Maeda, M Kojima, C Kawazu, M Murata, ...
Genome research 19 (2), 255-265, 2009
1482009
NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning
MS Klausen, MC Jespersen, H Nielsen, KK Jensen, VI Jurtz, ...
Proteins: Structure, Function, and Bioinformatics 87 (6), 520-527, 2019
1412019
A disentangled recognition and nonlinear dynamics model for unsupervised learning
M Fraccaro, S Kamronn, U Paquet, O Winther
arXiv preprint arXiv:1710.05741, 2017
1392017
Gaussian processes and SVM: Mean field and leave-one-out
AJ Smola, P Bartlett, B Schölkopf, D Schuurmans
MIT press, 2000
134*2000
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Articles 1–20