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Sofia K. Forslund
Sofia K. Forslund
Junior Group Leader, ECRC (joint Max Delbrück Center and Charité University Hospital unit), Berlin
Verified email at embl.de - Homepage
Title
Cited by
Cited by
Year
The Pfam protein families database
M Punta, PC Coggill, RY Eberhardt, J Mistry, J Tate, C Boursnell, N Pang, ...
Nucleic acids research 40 (D1), D290-D301, 2012
9741*2012
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
D Szklarczyk, AL Gable, D Lyon, A Junge, S Wyder, J Huerta-Cepas, ...
Nucleic acids research 47 (D1), D607-D613, 2019
90622019
STRING v10: protein–protein interaction networks, integrated over the tree of life
D Szklarczyk, A Franceschini, S Wyder, K Forslund, D Heller, ...
Nucleic acids research 43 (D1), D447-D452, 2015
86092015
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
J Huerta-Cepas, D Szklarczyk, K Forslund, H Cook, D Heller, MC Walter, ...
Nucleic acids research 44 (D1), D286-D293, 2016
16112016
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ...
Nature 528 (7581), 262-266, 2015
15642015
Fast genome-wide functional annotation through orthology assignment by eggNOG-mapper
J Huerta-Cepas, K Forslund, LP Coelho, D Szklarczyk, LJ Jensen, ...
Molecular biology and evolution 34 (8), 2115-2122, 2017
15382017
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
J Huerta-Cepas, D Szklarczyk, D Heller, A Hernández-Plaza, SK Forslund, ...
Nucleic acids research 47 (D1), D309-D314, 2019
13582019
Human gut microbes impact host serum metabolome and insulin sensitivity
HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ...
Nature 535 (7612), 376-381, 2016
12992016
Structure and function of the global topsoil microbiome
M Bahram, F Hildebrand, SK Forslund, JL Anderson, NA Soudzilovskaia, ...
Nature 560 (7717), 233-237, 2018
9262018
Salt-responsive gut commensal modulates TH17 axis and disease
N Wilck, MG Matus, SM Kearney, SW Olesen, K Forslund, ...
Nature 551 (7682), 585-589, 2017
7952017
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis
G Östlund, T Schmitt, K Forslund, T Köstler, DN Messina, S Roopra, ...
Nucleic acids research 38 (suppl_1), D196-D203, 2010
6922010
The Pfam protein families database
GC Hotz, K Forslund, SR Eddy, EL Sonnhammer, A Bateman
Nucleic Acids Res 36, S281-S288, 2008
5792008
Intestinal microbiome is related to lifetime antibiotic use in Finnish pre-school children
K Korpela, A Salonen, LJ Virta, RA Kekkonen, K Forslund, P Bork, ...
Nature communications 7 (1), 1-8, 2016
5602016
eggNOG v4. 0: nested orthology inference across 3686 organisms
S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ...
Nucleic acids research 42 (D1), D231-D239, 2014
4982014
Metagenomic species profiling using universal phylogenetic marker genes
S Sunagawa, DR Mende, G Zeller, F Izquierdo-Carrasco, SA Berger, ...
Nature methods 10 (12), 1196-1199, 2013
4372013
Country-specific antibiotic use practices impact the human gut resistome
K Forslund, S Sunagawa, JR Kultima, DR Mende, M Arumugam, A Typas, ...
Genome research 23 (7), 1163-1169, 2013
3762013
Recovery of gut microbiota of healthy adults following antibiotic exposure
A Palleja, KH Mikkelsen, SK Forslund, A Kashani, KH Allin, T Nielsen, ...
Nature microbiology 3 (11), 1255-1265, 2018
3652018
Short-chain fatty acid propionate protects from hypertensive cardiovascular damage
H Bartolomaeus, A Balogh, M Yakoub, S Homann, L Markó, S Höges, ...
Circulation 139 (11), 1407-1421, 2019
3072019
Propionic acid shapes the multiple sclerosis disease course by an immunomodulatory mechanism
A Duscha, B Gisevius, S Hirschberg, N Yissachar, GI Stangl, E Eilers, ...
Cell 180 (6), 1067-1080. e16, 2020
2162020
Database issue
RD Finn, J Mistry, J Tate, P Coggill, A Heger, JE Pollington, OL Gavin, ...
Nucleic Acids Res 38, 211-222, 2010
2072010
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