Sofia K. Forslund

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Peer BorkEMBLGeverifieerd e-mailadres voor embl.de
Jaime Huerta-CepasGroup Leader at CBGP (UPM-INIA), Madrid, SpainGeverifieerd e-mailadres voor embl.de
Christian von MeringProfessor of Computational Biology, University of Zurich and Swiss Institute of BioinformaticsGeverifieerd e-mailadres voor imls.uzh.ch
Damian SzklarczykSIB Swiss Institute of Bioinformatics / University of ZurichGeverifieerd e-mailadres voor isb-sib.ch
Lars Juhl JensenUniversity of CopenhagenGeverifieerd e-mailadres voor cpr.ku.dk
Alex BatemanHead of Protein Sequence Resources, EMBL-EBIGeverifieerd e-mailadres voor ebi.ac.uk
Robert D. FinnSequence Families Team Leader, EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambs, CB10 1SD, UKGeverifieerd e-mailadres voor ebi.ac.uk
Michael Kuhnstaff scientist in the lab of Peer Bork, EMBLGeverifieerd e-mailadres voor embl.de
Shinichi SunagawaETH Zürich; Swiss Institute of BioinformaticsGeverifieerd e-mailadres voor ethz.ch
Alexander RothUniversity of ZurichGeverifieerd e-mailadres voor uzh.ch
Daniel R. MendeAsst. Professor, Amsterdam University Medical Center, University of AmsterdamGeverifieerd e-mailadres voor amsterdamumc.nl
Jens Roat KultimaDanish Competition and Consumer Agency; Bioinformatics and Economic Fraud SpecialistGeverifieerd e-mailadres voor kfst.dk
Toni GabaldonGroup Leader, Institute for Research in Biomedicine (IRB) and Barcelona Supercomputing Centre (BSC)Geverifieerd e-mailadres voor crg.es
Manimozhiyan ArumugamAssociate Professor, Faculty of Health and Medical Sciences, University of CopenhagenGeverifieerd e-mailadres voor sund.ku.dk
Chris CreeveyProfessor of Computational Biology, Queen’s University BelfastGeverifieerd e-mailadres voor qub.ac.uk
Barbara HollandSchool of Natural Sciences (Maths), University of Tasmania, HobartGeverifieerd e-mailadres voor utas.edu.au
Korbinian StrimmerDepartment of Mathematics, The University of ManchesterGeverifieerd e-mailadres voor manchester.ac.uk
Daniel H. HusonProfessor of Algorithms in Bioinformatics, University of TuebingenGeverifieerd e-mailadres voor uni-tuebingen.de
Dr. Fabian SchreiberMedical Data Scientist, Charite Berlin

Sofia K. Forslund

Junior Group Leader, ECRC (joint Max Delbrück Center and Charité University Hospital unit), Berlin

Geverifieerd e-mailadres voor embl.de - Homepage

Cardiovascular and metabolic disease systems medicine evolutionary bioinformatics host-microbiome analysis antibiotic resist


Titel Sorteren op citaties Sorteren op jaar Sorteren op titel	Geciteerd door Geciteerd door	Jaar
The Pfam protein families database M Punta, PC Coggill, RY Eberhardt, J Mistry, J Tate, C Boursnell, N Pang, ... Nucleic acids research 40 (D1), D290-D301, 2012	9192*	2012
STRING v10: protein–protein interaction networks, integrated over the tree of life D Szklarczyk, A Franceschini, S Wyder, K Forslund, D Heller, ... Nucleic acids research 43 (D1), D447-D452, 2015	6532	2015
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences J Huerta-Cepas, D Szklarczyk, K Forslund, H Cook, D Heller, MC Walter, ... Nucleic acids research 44 (D1), D286-D293, 2016	1193	2016
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ... Nature 528 (7581), 262-266, 2015	1029	2015
Human gut microbes impact host serum metabolome and insulin sensitivity HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ... Nature 535 (7612), 376-381, 2016	797	2016
Fast genome-wide functional annotation through orthology assignment by eggNOG-mapper J Huerta-Cepas, K Forslund, LP Coelho, D Szklarczyk, LJ Jensen, ... Molecular biology and evolution 34 (8), 2115-2122, 2017	674	2017
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis G Östlund, T Schmitt, K Forslund, T Köstler, DN Messina, S Roopra, ... Nucleic acids research 38 (suppl_1), D196-D203, 2010	646	2010
Salt-responsive gut commensal modulates TH 17 axis and disease N Wilck, MG Matus, SM Kearney, SW Olesen, K Forslund, ... Nature 551 (7682), 585-589, 2017	407	2017
Intestinal microbiome is related to lifetime antibiotic use in Finnish pre-school children K Korpela, A Salonen, LJ Virta, RA Kekkonen, K Forslund, P Bork, ... Nature communications 7, 10410, 2016	407	2016
eggNOG v4. 0: nested orthology inference across 3686 organisms S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ... Nucleic acids research 42 (D1), D231-D239, 2014	407	2014
Country-specific antibiotic use practices impact the human gut resistome K Forslund, S Sunagawa, JR Kultima, DR Mende, M Arumugam, A Typas, ... Genome research 23 (7), 1163-1169, 2013	317	2013
Towards standards for human fecal sample processing in metagenomic studies PI Costea, G Zeller, S Sunagawa, E Pelletier, A Alberti, F Levenez, ... Nature biotechnology 35 (11), 1069-1076, 2017	297	2017
The Pfam protein families database GC Hotz, K Forslund, SR Eddy, ELL Sonnhammer, A Bateman Nucleic Acids Res 36, D281D288, 2008	206	2008
Database issue RD Finn, J Mistry, J Tate, P Coggill, A Heger, JE Pollington, OL Gavin, ... Nucleic Acids Res 38, 211-222, 2010	199	2010
Coggill RD Finn, J Tate, J Mistry P. c., Sammut, SJ, Hotz, HR, Ceric, G., Forslund, K., Eddy, SR, Sonnhammer …, 2008	178	2008
Standardized benchmarking in the quest for orthologs AM Altenhoff, B Boeckmann, S Capella-Gutierrez, DA Dalquen, T DeLuca, ... Nature methods 13 (5), 425-430, 2016	140	2016
Predicting protein function from domain content K Forslund, ELL Sonnhammer Bioinformatics 24 (15), 1681-1687, 2008	103	2008
MOCAT2: a metagenomic assembly, annotation and profiling framework JR Kultima, LP Coelho, K Forslund, J Huerta-Cepas, SS Li, M Driessen, ... Bioinformatics 32 (16), 2520-2523, 2016	97	2016
Domain tree-based analysis of protein architecture evolution K Forslund, A Henricson, V Hollich, ELL Sonnhammer Molecular biology and evolution 25 (2), 254-264, 2008	90	2008
QNet: an agglomerative method for the construction of phylogenetic networks from weighted quartets S Grünewald, K Forslund, A Dress, V Moulton Molecular Biology and Evolution 24 (2), 532-538, 2007	69	2007

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