Jose F. Munoz
Jose F. Munoz
Scientist, Broad Institute of MIT & Harvard
Verified email at - Homepage
Cited by
Cited by
Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species
JF Muñoz, L Gade, NA Chow, VN Loparev, P Juieng, EL Berkow, ...
Nature communications 9 (1), 5346, 2018
Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses
NA Chow, JF Muñoz, L Gade, EL Berkow, X Li, RM Welsh, K Forsberg, ...
mBio 11 (2), 1-15, 2020
Novel taxa of thermally dimorphic systemic pathogens in the Ajellomycetaceae (Onygenales)
K Dukik, JF Muñoz, Y Jiang, P Feng, L Sigler, JB Stielow, J Freeke, ...
Mycoses 60 (5), 296-309, 2017
Genetic Analysis of Candida auris Implicates Hsp90 in Morphogenesis and Azole Tolerance and Cdr1 in Azole Resistance
SH Kim, KR Iyer, L Pardeshi, JF Muñoz, N Robbins, CA Cuomo, KH Wong, ...
MBio 10 (1), 10.1128/mbio. 02529-18, 2019
Genome Diversity, Recombination, and Virulence across the Major Lineages of Paracoccidioides
JF Muñoz, RA Farrer, CA Desjardins, JE Gallo, S Sykes, S Sakthikumar, ...
MSphere 1 (5), 10.1128/msphere. 00213-16, 2016
Mutations in TAC1B: a Novel Genetic Determinant of Clinical Fluconazole Resistance in Candida auris
JM Rybak, JF Muñoz, KS Barker, JE Parker, BD Esquivel, EL Berkow, ...
MBio 11 (3), 10.1128/mbio. 00365-20, 2020
Genome-wide analysis of experimentally evolved Candida auris reveals multiple novel mechanisms of multidrug resistance
H Carolus, S Pierson, JF Muñoz, A Subotić, RB Cruz, CA Cuomo, ...
MBio 12 (2), 10.1128/mbio. 03333-20, 2021
Phylogeny, ecology and taxonomy of systemic pathogens and their relatives in Ajellomycetaceae (Onygenales): Blastomyces, Emergomyces, Emmonsia, Emmonsiellopsis
Y Jiang, K Dukik, JF Muñoz, L Sigler, IS Schwartz, NP Govender, ...
Fungal Diversity 90, 245-291, 2018
Identification of Candida auris by use of the updated Vitek 2 yeast identification system, version 8.01: a multilaboratory evaluation study
G Ambaraghassi, PJ Dufresne, SF Dufresne, É Vallières, JF Muñoz, ...
Journal of clinical microbiology 57 (11), 10.1128/jcm. 00884-19, 2019
50 Years of Emmonsia Disease in Humans: The Dramatic Emergence of a Cluster of Novel Fungal Pathogens
IS Schwartz, C Kenyon, P Feng, NP Govender, K Dukik, L Sigler, Y Jiang, ...
PLoS pathogens 11 (11), e1005198, 2015
Best practices on the differential expression analysis of multi-species RNA-seq
M Chung, VM Bruno, DA Rasko, CA Cuomo, JF Muñoz, J Livny, AC Shetty, ...
Genome biology 22 (1), 121, 2021
Coordinated host-pathogen transcriptional dynamics revealed using sorted subpopulations and single macrophages infected with Candida albicans
JF Muñoz, T Delorey, CB Ford, BY Li, DA Thompson, RP Rao, CA Cuomo
Nature communications 10 (1), 1607, 2019
The Dynamic Genome and Transcriptome of the Human Fungal Pathogen Blastomyces and Close Relative Emmonsia
JF Muñoz, GM Gauthier, CA Desjardins, JE Gallo, J Holder, TD Sullivan, ...
PLoS genetics 11 (10), e1005493, 2015
Tracing the evolutionary history and global expansion of Candida auris using population genomic analyses. mBio 11: e03364-19
NA Chow, JF Muñoz, L Gade, EL Berkow, X Li, RM Welsh, K Forsberg, ...
Emergomyces: The global rise of new dimorphic fungal pathogens
IS Schwartz, NP Govender, L Sigler, Y Jiang, TG Maphanga, B Toplis, ...
PLoS Pathogens 15 (9), e1007977, 2019
Identification and Analysis of the Role of Superoxide Dismutases Isoforms in the Pathogenesis of Paracoccidioides spp.
D Tamayo, JF Muñoz, Á Lopez, M Urán, J Herrera, CL Borges, Á Restrepo, ...
PLoS Neglected Tropical Diseases 10 (3), e0004481, 2016
Inhibition of PbGP43 Expression May Suggest that gp43 is a Virulence Factor in Paracoccidioides brasiliensis
I Torres, O Hernandez, D Tamayo, JF Munoz, NP Leitao Jr, AM Garcia, ...
PloS one 8 (7), e68434, 2013
Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris
JF Muñoz, RM Welsh, T Shea, D Batra, L Gade, D Howard, LA Rowe, ...
Genetics 218 (1), iyab029, 2021
Involvement of the 90 kDa heat shock protein during adaptation of Paracoccidioides brasiliensis to different environmental conditions
D Tamayo, JF Muñoz, I Torres, AJ Almeida, A Restrepo, JG McEwen, ...
Fungal genetics and biology 51, 34-41, 2013
An oxindole efflux inhibitor potentiates azoles and impairs virulence in the fungal pathogen Candida auris
KR Iyer, K Camara, M Daniel-Ivad, R Trilles, SM Pimentel-Elardo, ...
Nature communications 11 (1), 6429, 2020
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Articles 1–20