|Metagenomics of hydrocarbon resource environments indicates aerobic taxa and genes to be unexpectedly common|
D An, SM Caffrey, J Soh, A Agrawal, D Brown, K Budwill, X Dong, ...
Environmental science & technology 47 (18), 10708-10717, 2013
|IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses|
D Paez-Espino, IMA Chen, K Palaniappan, A Ratner, K Chu, E Szeto, ...
Nucleic acids research 45 (D1), gkw1030, 2016
|Function of Periplasmic Hydrogenases in the Sulfate-Reducing Bacterium Desulfovibrio vulgaris Hildenborough|
SM Caffrey, HS Park, JK Voordouw, Z He, J Zhou, G Voordouw
Journal of bacteriology 189 (17), 6159-6167, 2007
|Effect of sodium bisulfite injection on the microbial community composition in a brackish-water-transporting pipeline|
HS Park, I Chatterjee, X Dong, SH Wang, CW Sensen, SM Caffrey, ...
Applied and environmental microbiology 77 (19), 6908-6917, 2011
|Phoenix 2: a locally installable large-scale 16S rRNA gene sequence analysis pipeline with Web interface|
J Soh, X Dong, SM Caffrey, G Voordouw, CW Sensen
Journal of biotechnology 167 (4), 393-403, 2013
|Microbial community succession in a bioreactor modeling a souring low-temperature oil reservoir subjected to nitrate injection|
CM Callbeck, X Dong, I Chatterjee, A Agrawal, SM Caffrey, CW Sensen, ...
Applied microbiology and biotechnology 91 (3), 799-810, 2011
|Microbial community and potential functional gene diversity involved in anaerobic hydrocarbon degradation and methanogenesis in an oil sands tailings pond|
D An, D Brown, I Chatterjee, X Dong, E Ramos-Padron, S Wilson, ...
Genome 56 (10), 612-618, 2013
|Effect of sulfide on growth physiology and gene expression of Desulfovibrio vulgaris Hildenborough|
SM Caffrey, G Voordouw
Antonie Van Leeuwenhoek 97 (1), 11-20, 2010
|A genomic island of the sulfate‐reducing bacterium Desulfovibrio vulgaris Hildenborough promotes survival under stress conditions while decreasing the efficiency …|
S Johnston, S Lin, P Lee, SM Caffrey, J Wildschut, JK Voordouw, ...
Environmental microbiology 11 (4), 981-991, 2009
|Gene Expression by the Sulfate-Reducing Bacterium Desulfovibrio vulgaris Hildenborough Grown on an Iron Electrode under Cathodic Protection Conditions|
SM Caffrey, HS Park, J Been, P Gordon, CW Sensen, G Voordouw
Applied and environmental microbiology 74 (8), 2404-2413, 2008
|Effects of biocides on gene expression in the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough|
MHP Lee, SM Caffrey, JK Voordouw, G Voordouw
Applied microbiology and biotechnology 87 (3), 1109-1118, 2010
|Roles of thermophiles and fungi in bitumen degradation in mostly cold oil sands outcrops|
ML Wong, D An, SM Caffrey, J Soh, X Dong, CW Sensen, TBP Oldenburg, ...
Applied and environmental microbiology 81 (19), 6825-6838, 2015
|Contribution of make-up water to the microbial community in an oilfield from which oil is produced by produced water re-injection|
Y Folarin, D An, S Caffrey, J Soh, CW Sensen, J Voordouw, T Jack, ...
International biodeterioration & biodegradation 81, 44-50, 2013
|Applications of molecular microbiological methods|
TL Skovhus, SM Caffrey, CRJ Hubert
Caister Academic Press, 2014
|Molecular methods in microbiologically influenced corrosion research, monitoring and control|
G Muyzer, F Marty
NorfolkCaister Academic Press, 2014
|Application of molecular microbiological methods to the oil industry to analyse DNA, RNA and proteins|
Applied Microbiology and Molecular Biology in Oilfield Systems, 19-26, 2010
|Oxygen exposure increases resistance of Desulfovibrio vulgaris Hildenborough to killing by hydrogen peroxide|
JD Wildschut, SM Caffrey, JK Voordouw, G Voordouw
Antonie Van Leeuwenhoek 101 (2), 303-311, 2012
|Gene array analysis of sulfate-reducing bacteria grown on an iron electrode under conditions of cathodic protection|
SM Caffrey, HS Park, G Voordouw, J Been
CORROSION 2008, 2008
|Using the core and supra genomes to determine diversity and natural proclivities among bacterial strains|
L Nistico, J Earl, L Hiller, A Ahmed, A Retchless, B Janto, JW Costerton, ...
Molecular Methods and Applications in Microbiology, 2014
|Which microbial communities are present? Sequence-based metagenomics|
Applied Microbiology and Molecular Biology in Oilfield Systems, 63-76, 2010