| Haplotyping germline and cancer genomes with high-throughput linked-read sequencing GXY Zheng, BT Lau, M Schnall-Levin, M Jarosz, JM Bell, CM Hindson, ... Nature biotechnology 34 (3), 303-311, 2016 | 815 | 2016 |
| Multi-platform discovery of haplotype-resolved structural variation in human genomes MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ... Nature communications 10 (1), 1784, 2019 | 751 | 2019 |
| An open resource for accurately benchmarking small variant and reference calls JM Zook, J McDaniel, ND Olson, J Wagner, H Parikh, H Heaton, SA Irvine, ... Nature biotechnology 37 (5), 561, 2019 | 305 | 2019 |
| Souporcell: robust clustering of single-cell RNA-seq data by genotype without reference genotypes H Heaton, AM Talman, A Knights, M Imaz, DJ Gaffney, R Durbin, ... Nature methods 17 (6), 615-620, 2020 | 257 | 2020 |
| The Malaria Cell Atlas: Single parasite transcriptomes across the complete Plasmodium life cycle VM Howick, AJC Russell, T Andrews, H Heaton, AJ Reid, K Natarajan, ... Science 365 (6455), eaaw2619, 2019 | 211 | 2019 |
| Resolving the full spectrum of human genome variation using Linked-Reads P Marks, S Garcia, AM Barrio, K Belhocine, J Bernate, R Bharadwaj, ... Genome research 29 (4), 635-645, 2019 | 205 | 2019 |
| Systems and methods for determining structural variation and phasing using variant call data S Kyriazopoulou-Panagiotopoulou, P Marks, M Schnall-Levin, X Zheng, ... US Patent 10,854,315, 2020 | 126 | 2020 |
| A High-Quality De novo Genome Assembly from a Single Mosquito Using PacBio Sequencing SB Kingan, H Heaton, J Cudini, CC Lambert, P Baybayan, BD Galvin, ... Genes 10 (1), 62, 2019 | 123 | 2019 |
| Human-specific tandem repeat expansion and differential gene expression during primate evolution A Sulovari, R Li, PA Audano, D Porubsky, MR Vollger, GA Logsdon, ... Proceedings of the National Academy of Sciences 116 (46), 23243-23253, 2019 | 93 | 2019 |
| Gremlin 2 promotes differentiation of embryonic stem cells to atrial fate by activation of the JNK signaling pathway V Tanwar, JB Bylund, J Hu, J Yan, JM Walthall, A Mukherjee, WH Heaton, ... Stem Cells 32 (7), 1774-1788, 2014 | 57 | 2014 |
| Reproducible integration of multiple sequencing datasets to form high-confidence SNP, indel, and reference calls for five human genome reference materials J Zook, J McDaniel, H Parikh, H Heaton, SA Irvine, L Trigg, R Truty, ... BioRxiv, 281006, 2018 | 53 | 2018 |
| Multi-platform discovery of haplotype-resolved structural variation in human genomes. Nat Commun. 2019; 10 (1): 1784 MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ... Epub 2019/04/18. https://doi. org/10.1038/s41467-018-08148-z PMID: 30992455, 0 | 30 | |
| Multi-platform discovery of haplotype-resolved structural variation in human genomes. Nat. Commun. 10, 1784 MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ... | 18 | 2019 |
| The Malaria Cell Atlas: single parasite transcriptomes across the complete Plasmodium life cycle. Science 365: eaaw2619 VM Howick, AJC Russell, T Andrews, H Heaton, AJ Reid, K Natarajan, ... | 14 | 2019 |
| A high-quality de novo genome assembly from a single mosquito using PacBio sequencing. Genes (Basel) 10: 62 SB Kingan, H Heaton, J Cudini, CC Lambert, P Baybayan, BD Galvin, ... | 6 | 2019 |
| souporcell: robust clustering of single cell RNAseq by genotype and ambient RNA inference without reference genotypes. bioRxiv 2019 H Heaton, AM Talman, A Knights, M Imaz, D Gaffney, R Durbin | 6 | |
| The genome sequence of the malaria mosquito, Anopheles funestus, Giles, 1900 D Ayala, O Akone-Ella, P Kengne, H Johnson, H Heaton, J Collins, ... Wellcome Open Research 7, 2022 | 4 | 2022 |
| A Low DNA Input Protocol for High-quality PacBio De Novo Genome Assemblies from Single Invertebrate Individuals SB Kingan, H Heaton, J Cudini, N Holroyd, A Tracey, CC Lambert, ... Plant and Animal Genome XXVII Conference (January 12-16, 2019), 2019 | 2 | 2019 |
| A chromosomal reference genome sequence for the malaria mosquito, Anopheles moucheti, Evans, 1925 SN Nsango, JP Agbor, D Ayala, HF Johnson, H Heaton, MG Wagah, ... Wellcome Open Research 8, 2023 | 1 | 2023 |
| Systems and methods for determining structural variation and phasing using variant call data S Kyriazopoulou-Panagiotopoulou, P Marks, M Schnall-Levin, X Zheng, ... US Patent App. 17/098,139, 2021 | 1 | 2021 |
Patrick Marks10x GenomicsVerified email at 10xgenomics.com
