SPiCE: a web-based tool for sequence-based protein classification and exploration BA van den Berg, MJT Reinders, JA Roubos, D Ridder BMC bioinformatics 15 (1), 1-10, 2014 | 21 | 2014 |
Exploring Sequence Characteristics Related to High-Level Production of Secreted Proteins in Aspergillus niger BA van den Berg, MJT Reinders, M Hulsman, L Wu, HJ Pel, JA Roubos, ... PLOS ONE 7 (10), e45869, 2012 | 16 | 2012 |
Protein redesign by learning from data BA van den Berg, MJT Reinders, JM van der Laan, JA Roubos, ... Protein Engineering, Design & Selection 27 (9), 281-288, 2014 | 9 | 2014 |
Sequence-based prediction of protein secretion success in Aspergillus niger B van den Berg, J Nijkamp, M Reinders, L Wu, H Pel, J Roubos, ... Pattern Recognition in Bioinformatics, 3-14, 2010 | 5 | 2010 |
Insight into neutral and disease-associated human genetic variants through interpretable predictors BA van den Berg, MJT Reinders, D de Ridder, TAP de Beer Plos one 10 (3), e0120729, 2015 | 2 | 2015 |
Polypeptide expression method JA Roubos, JM Van Der Laan, B van den Berg, D De Ridder US Patent App. 14/394,771, 2015 | 1 | 2015 |
Predicting functional effect of human missense mutations BA van den Berg, JM Thornton, MJT Reinders, D de Ridder, TAP Beer | | 2013 |
A rational protein redesign method for improved secretion yields in Aspergillus niger B van den Berg, M Reinders, JM van der Laan, JA Roubos, D de Ridder | | 2012 |
Proposal for an enzyme redesign method to improve production rates in Aspergillus niger BA van den Berg, MJT Reinders, HJ Pel, JA Roubos, D de Ridder | | 2012 |
Toward tunable RNA thermo-switches for temperature dependent gene expression OMJA Stassen, RJJ Jorna, BA Berg, R Haghi, F Ehtemam, SM Flipse, ... arXiv preprint arXiv:1109.5402, 2011 | | 2011 |
Relating sequence properties to protein secretion BA van den Berg, MJT Reinders, HJ Pel, L Wu, JA Roubos, D de Ridder NBIC Conference 2011, 2011 | | 2011 |
Relating amino acid patterns to successful high-level protein secretion in Aspergillus niger B van den Berg, M Hulsman, M Reinders, L Wu, HJ Pel, JA Roubos, ... NBIC Conference 2011, 2011 | | 2011 |
A classifier approach to predict protein secretion in Aspergillus niger B van den Berg, J Nijkamp, M Reinders, H Pel, L Wu, J Roubos ISMB 2010, 2010 | | 2010 |
Logic gene network design: a software tool based on modularity and standardization B van den Berg, M Reinders, D Bellomo NBIC Conference 2009, 2009 | | 2009 |
Logic gene network design: a CAD tool based on modularity and standardization BA van den Berg Delft University of Technology, 2009 | | 2009 |
Designing RNA thermometers as part of the iGEM 2008 project BA van den Berg, D Bellomo, MJT Reinders | | 2008 |