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Jessica Alfoldi
Jessica Alfoldi
Broad Institute of MIT and Harvard
Geverifieerd e-mailadres voor broadinstitute.org
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A high-resolution map of human evolutionary constraint using 29 mammals
K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ...
Nature 478 (7370), 476-482, 2011
12602011
Variation across 141,456 human exomes and genomes reveals the spectrum of loss-of-function intolerance across human protein-coding genes
KJ Karczewski, LC Francioli, G Tiao, BB Cummings, J Alföldi, Q Wang, ...
BioRxiv, 531210, 2019
11712019
The genomic substrate for adaptive radiation in African cichlid fish
D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ...
Nature 513 (7518), 375-381, 2014
10252014
A structural variation reference for medical and population genetics
RL Collins, H Brand, KJ Karczewski, X Zhao, J Alföldi, LC Francioli, ...
Nature 581 (7809), 444-451, 2020
7502020
The African coelacanth genome provides insights into tetrapod evolution
CT Amemiya, J Alföldi, AP Lee, S Fan, H Philippe, I MacCallum, I Braasch, ...
Nature 496 (7445), 311-316, 2013
7302013
The genome of the green anole lizard and a comparative analysis with birds and mammals
J Alföldi, F Di Palma, M Grabherr, C Williams, L Kong, E Mauceli, ...
Nature 477 (7366), 587-591, 2011
6962011
Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators.
DW Bellott, JF Hughes, H Skaletsky, LG Brown, T Pyntikova, TJ Cho, ...
Nature 508, 494-499, 2014
6392014
The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons
I Braasch, AR Gehrke, JJ Smith, K Kawasaki, T Manousaki, J Pasquier, ...
Nature genetics 48 (4), 427-437, 2016
5742016
Convergent evolution of the genomes of marine mammals
AD Foote, Y Liu, GWC Thomas, T Vinař, J Alföldi, J Deng, S Dugan, ...
Nature genetics 47 (3), 272-275, 2015
4392015
Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication
M Carneiro, CJ Rubin, F Di Palma, FW Albert, J Alföldi, AM Barrio, ...
Science 345 (6200), 1074-1079, 2014
4182014
FEELnc: a tool for long non-coding RNA annotation and its application to the dog transcriptome
V Wucher, F Legeai, B Hédan, G Rizk, L Lagoutte, T Leeb, V Jagannathan, ...
Nucleic acids research 45 (8), e57-e57, 2017
3862017
Progressive alignment with Cactus: a multiple-genome aligner for the thousand-genome era
J Armstrong, G Hickey, M Diekhans, A Deran, Q Fang, D Xie, S Feng, ...
bioRxiv, 730531, 2019
329*2019
Sequencing the Mouse Y Chromosome Reveals Convergent Gene Acquisition and Amplification on Both Sex Chromosomes
YQS Soh, J Alföldi, T Pyntikova, LG Brown, T Graves, PJ Minx, RS Fulton, ...
Cell 159 (4), 800-813, 2014
2982014
Genome-wide synteny through highly sensitive sequence alignment: Satsuma
MG Grabherr, P Russell, M Meyer, E Mauceli, J Alföldi, F Di Palma, ...
Bioinformatics 26 (9), 1145-1151, 2010
2852010
An Improved Canine Genome and a Comprehensive Catalogue of Coding Genes and Non-Coding Transcripts
MP Hoeppner, A Lundquist, M Pirun, JRS Meadows, N Zamani, ...
PloS one 9 (3), e91172, 2014
2472014
Comparative genomics as a tool to understand evolution and disease
J Alföldi, K Lindblad-Toh
Genome Research 23 (7), 1063-1068, 2013
2062013
A genome-wide mutational constraint map quantified from variation in 76,156 human genomes
S Chen, LC Francioli, JK Goodrich, RL Collins, M Kanai, Q Wang, J Alföldi, ...
bioRxiv, 2022.03. 20.485034, 2022
1932022
Comprehensive analysis of genetic ancestry and its molecular correlates in cancer
J Carrot-Zhang, N Chambwe, JS Damrauer, TA Knijnenburg, ...
Cancer Cell 37 (5), 639-654. e6, 2020
1902020
Transcript expression-aware annotation improves rare variant discovery and interpretation
BB Cummings, KJ Karczewski, JA Kosmicki, EG Seaby, NA Watts, ...
BioRxiv, 554444, 2019
179*2019
A comprehensive genomic history of extinct and living elephants
E Palkopoulou, M Lipson, S Mallick, S Nielsen, N Rohland, S Baleka, ...
Proceedings of the National Academy of Sciences 115 (11), E2566-E2574, 2018
1762018
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Artikelen 1–20