Christelle Desnues

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Didier RaoultIHU Méditerranée Infection, Aix Marseille Université, AP-HM CHU Timone, Marseille, FRANCEVerified email at univ-amu.fr
Rob EdwardsMatthew Flinders Fellow of Bioinformatics, Flinders University, Adelaide, SA, AustraliaVerified email at flinders.edu.au
Forest RohwerSan Diego State UniversityVerified email at mail.sdsu.edu
laura fancelloPostdoctoral researcher, IRIG (CEA, CNRS, INSERM, Université Grenoble Alpes), EDyP-labVerified email at cea.fr
linda wegley kellyScripps Institution of Oceanography - UC San DiegoVerified email at ucsd.edu
Florent E AnglyGenomic data analyst, The University of QueenslandVerified email at uq.edu.au
Rebecca Vega ThurberDistinguished Professor of Microbiology Oregon State UniversityVerified email at oregonstate.edu
Nikolay PopgeorgievAssociate professor, Department of Information Flow in the Cancer Cell, Cancer Research Center, LyonVerified email at univ-lyon1.fr
Liz DinsdaleMatthew Flinders Fellow of Marine Biology, Professor, Flinders University, South AustraliaVerified email at flinders.edu.au
Philippe ColsonIHU Méditerranée Infection, Aix-Marseille Univ, AP-HM, URMITE UM63/CNRS7278/IRD198/INSERM 1095Verified email at univ-amu.fr
Nicolás RascovanInstitut Pasteur, Paris, FranceVerified email at pasteur.fr
Yijun RuanProfessor and Director, Genomic SciencesVerified email at jax.org
Mya BreitbartUniversity of South FloridaVerified email at marine.usf.edu
Brandon K. SwanBattelle National Biodefense InstituteVerified email at ucsbalum.com
David L. ValentineNorris Presidential Chair, Professor of Earth Science and Biology, UC Santa BarbaraVerified email at geol.ucsb.edu
Eugene KooninSenior Investigator, NCBI, NIHVerified email at ncbi.nlm.nih.gov
Sebastien HalaryMuseum National d'Histoire NaturelleVerified email at mnhn.fr
Jean-Marc RolainMEPHI, IHU Méditerranée Infection, Aix-Marseille UniversityVerified email at univ-amu.fr
valerie MichoteyProfessor of marine microbial ecology, Aix-Marseille UniversityVerified email at univ-amu.fr
R. Pamela ReidUniversity of MiamiVerified email at rsmas.miami.edu

Christelle Desnues

CNRS researcher, Mediterranean Institute of Oceanography, associated researcher IHU Méditerranée

Verified email at univ-amu.fr - Homepage

Microbial and viral ecology host-associated viruses viral metagenomics infectious diseases virome


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Functional metagenomic profiling of nine biomes EA Dinsdale, RA Edwards, D Hall, F Angly, M Breitbart, JM Brulc, ... Nature 452 (7187), 629-632, 2008	1129	2008
The virophage as a unique parasite of the giant mimivirus B La Scola, C Desnues, I Pagnier, C Robert, L Barrassi, G Fournous, ... Nature 455 (7209), 100-104, 2008	718	2008
Metagenomic analysis of stressed coral holobionts RV Thurber, D Willner‐Hall, B Rodriguez‐Mueller, C Desnues, ... Environmental microbiology 11 (8), 2148-2163, 2009	712	2009
Minimum information about an uncultivated virus genome (MIUViG) S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ... Nature biotechnology 37 (1), 29-37, 2019	513	2019
Viral and microbial community dynamics in four aquatic environments B Rodriguez-Brito, LL Li, L Wegley, M Furlan, F Angly, M Breitbart, ... The ISME journal 4 (6), 739-751, 2010	465	2010
Emergence and spread of basal lineages of Yersinia pestis during the Neolithic decline N Rascovan, KG Sjögren, K Kristiansen, R Nielsen, E Willerslev, ... Cell 176 (1), 295-305. e10, 2019	306	2019
Biodiversity and biogeography of phages in modern stromatolites and thrombolites C Desnues, B Rodriguez-Brito, S Rayhawk, S Kelley, T Tran, M Haynes, ... Nature 452 (7185), 340-343, 2008	298	2008
Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa RL Vega Thurber, KL Barott, D Hall, H Liu, B Rodriguez-Mueller, ... Proceedings of the National Academy of Sciences 105 (47), 18413-18418, 2008	248	2008
A global metagenomic map of urban microbiomes and antimicrobial resistance D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ... Cell 184 (13), 3376-3393. e17, 2021	244	2021
The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes FE Angly, D Willner, A Prieto-Davó, RA Edwards, R Schmieder, ... PLoS computational biology 5 (12), e1000593, 2009	243	2009
Global phylogeography and ancient evolution of the widespread human gut virus crAssphage RA Edwards, AA Vega, HM Norman, M Ohaeri, K Levi, EA Dinsdale, ... Nature microbiology 4 (10), 1727-1736, 2019	225	2019
Pepper mild mottle virus, a plant virus associated with specific immune responses, fever, abdominal pains, and pruritus in humans P Colson, H Richet, C Desnues, F Balique, V Moal, JJ Grob, P Berbis, ... PloS one 5 (4), e10041, 2010	219	2010
Provirophages and transpovirons as the diverse mobilome of giant viruses C Desnues, B La Scola, N Yutin, G Fournous, C Robert, S Azza, P Jardot, ... Proceedings of the National Academy of Sciences 109 (44), 18078-18083, 2012	213	2012
Mimivirus shows dramatic genome reduction after intraamoebal culture M Boyer, S Azza, L Barrassi, T Klose, A Campocasso, I Pagnier, ... Proceedings of the National Academy of Sciences 108 (25), 10296-10301, 2011	145	2011
Metagenomics and the human virome in asymptomatic individuals N Rascovan, R Duraisamy, C Desnues Annual review of microbiology 70 (1), 125-141, 2016	140	2016
Viruses in the desert: a metagenomic survey of viral communities in four perennial ponds of the Mauritanian Sahara L Fancello, S Trape, C Robert, M Boyer, N Popgeorgiev, D Raoult, ... The ISME journal 7 (2), 359-369, 2013	133	2013
The metagenomics and metadesign of the subways and urban biomes (MetaSUB) international consortium inaugural meeting report Microbiome 4 (1), 24, 2016	125	2016
Evidence of the megavirome in humans P Colson, L Fancello, G Gimenez, F Armougom, C Desnues, G Fournous, ... Journal of Clinical Virology 57 (3), 191-200, 2013	115	2013
Marseillevirus-like virus recovered from blood donated by asymptomatic humans N Popgeorgiev, M Boyer, L Fancello, S Monteil, C Robert, R Rivet, ... The Journal of infectious diseases 208 (7), 1042-1050, 2013	105	2013
Hybrid capture-based next generation sequencing and its application to human infectious diseases M Gaudin, C Desnues Frontiers in microbiology 9, 2924, 2018	103	2018

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