| Genome architectures revealed by tethered chromosome conformation capture and population-based modeling R Kalhor, H Tjong, N Jayathilaka, F Alber, L Chen Nature biotechnology 30 (1), 90-98, 2011 | 638 | 2011 |
| TopDom: an efficient and deterministic method for identifying topological domains in genomes H Shin, Y Shi, C Dai, H Tjong, K Gong, F Alber, XJ Zhou Nucleic acids research 44 (7), e70-e70, 2016 | 268 | 2016 |
| Physical tethering and volume exclusion determine higher-order genome organization in budding yeast H Tjong, K Gong, L Chen, F Alber Genome research 22 (7), 1295-1305, 2012 | 231 | 2012 |
| Population-based 3D genome structure analysis reveals driving forces in spatial genome organization H Tjong, W Li, R Kalhor, C Dai, S Hao, K Gong, Y Zhou, H Li, XJ Zhou, ... Proceedings of the National Academy of Sciences 113 (12), E1663-E1672, 2016 | 187 | 2016 |
| DISPLAR: an accurate method for predicting DNA-binding sites on protein surfaces H Tjong, HX Zhou Nucleic Acids Research 35 (5), 1465-1477, 2007 | 164 | 2007 |
| Oncogenic extrachromosomal DNA functions as mobile enhancers to globally amplify chromosomal transcription Y Zhu, AD Gujar, CH Wong, H Tjong, CY Ngan, L Gong, YA Chen, H Kim, ... Cancer cell 39 (5), 694-707. e7, 2021 | 129 | 2021 |
| Chromatin interaction analyses elucidate the roles of PRC2-bound silencers in mouse development CY Ngan, CH Wong, H Tjong, W Wang, RL Goldfeder, C Choi, H He, ... Nature genetics 52 (3), 264-272, 2020 | 113 | 2020 |
| GBr6: A parameterization-free, accurate, analytical generalized Born method H Tjong, HX Zhou The Journal of Physical Chemistry B 111 (11), 3055-3061, 2007 | 112 | 2007 |
| Picky comprehensively detects high-resolution structural variants in nanopore long reads L Gong, CH Wong, WC Cheng, H Tjong, F Menghi, CY Ngan, ET Liu, ... Nature methods 15 (6), 455-460, 2018 | 96 | 2018 |
| The three-dimensional genome organization of Drosophila melanogaster through data integration Q Li, H Tjong, X Li, K Gong, XJ Zhou, I Chiolo, F Alber Genome biology 18, 1-22, 2017 | 94 | 2017 |
| Mapping the global chromatin connectivity network for Sox2 function in neural stem cell maintenance JA Bertolini, R Favaro, Y Zhu, M Pagin, CY Ngan, CH Wong, H Tjong, ... Cell stem cell 24 (3), 462-476. e6, 2019 | 80 | 2019 |
| Producing genome structure populations with the dynamic and automated PGS software N Hua, H Tjong, H Shin, K Gong, XJ Zhou, F Alber Nature protocols 13 (5), 915-926, 2018 | 62 | 2018 |
| Prediction of protein solubility from calculation of transfer free energy H Tjong, HX Zhou Biophysical journal 95 (6), 2601-2609, 2008 | 62 | 2008 |
| GBr6NL: A generalized Born method for accurately reproducing solvation energy of the nonlinear Poisson-Boltzmann equation H Tjong, HX Zhou The Journal of chemical physics 126 (19), 2007 | 57 | 2007 |
| Spontaneous conformational change and toxin binding in α7 acetylcholine receptor: Insight into channel activation and inhibition M Yi, H Tjong, HX Zhou Proceedings of the National Academy of Sciences 105 (24), 8280-8285, 2008 | 53 | 2008 |
| Mining 3D genome structure populations identifies major factors governing the stability of regulatory communities C Dai, W Li, H Tjong, S Hao, Y Zhou, Q Li, L Chen, B Zhu, F Alber, ... Nature communications 7 (1), 1-11, 2016 | 42 | 2016 |
| Exploring the spatial and temporal organization of a cell’s proteome M Beck, M Topf, Z Frazier, H Tjong, M Xu, S Zhang, F Alber Journal of Structural Biology 173 (3), 483-496, 2011 | 42 | 2011 |
| PI2PE: protein interface/interior prediction engine H Tjong, S Qin, HX Zhou Nucleic acids research 35 (suppl_2), W357-W362, 2007 | 39 | 2007 |
| Global reorganization of budding yeast chromosome conformation in different physiological conditions E Dultz, H Tjong, E Weider, M Herzog, B Young, C Brune, D Müllner, ... Journal of Cell Biology 212 (3), 321-334, 2016 | 35 | 2016 |
| On the dielectric boundary in Poisson− Boltzmann calculations H Tjong, HX Zhou Journal of chemical theory and computation 4 (3), 507-514, 2008 | 34 | 2008 |
Huan-Xiang ZhouProfessor of Chemistry and Physics and LAS Science Endowed Chair, University of Illinois at ChicagoVerified email at uic.edu
