Harriet Alexander
Harriet Alexander
Verified email at whoi.edu - Homepage
TitleCited byYear
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
374*2019
The transcriptome and proteome of the diatom Thalassiosira pseudonana reveal a diverse phosphorus stress response
ST Dyhrman, BD Jenkins, TA Rynearson, MA Saito, ML Mercier, ...
PloS one 7 (3), 2012
2022012
Metatranscriptome analyses indicate resource partitioning between diatoms in the field
H Alexander, BD Jenkins, TA Rynearson, ST Dyhrman
Proceedings of the National Academy of Sciences 112 (17), E2182-E2190, 2015
752015
Probing the evolution, ecology and physiology of marine protists using transcriptomics
DA Caron, H Alexander, AE Allen, JM Archibald, EV Armbrust, C Bachy, ...
Nature Reviews Microbiology 15 (1), 6-20, 2017
632017
Functional group-specific traits drive phytoplankton dynamics in the oligotrophic ocean
H Alexander, M Rouco, ST Haley, ST Wilson, DM Karl, ST Dyhrman
Proceedings of the National Academy of Sciences 112 (44), E5972-E5979, 2015
542015
Virus-host relationships of marine single-celled eukaryotes resolved from metatranscriptomics
M Moniruzzaman, LL Wurch, H Alexander, ST Dyhrman, CJ Gobler, ...
Nature communications 8 (1), 1-10, 2017
322017
Sixty years of Sverdrup: A retrospective of progress in the study of phytoplankton blooms
AD Fischer, EA Moberg, H Alexander, EF Brownlee, KR Hunter-Cevera, ...
Oceanography 27 (1), 222-235, 2014
312014
Identifying reference genes with stable expression from high throughput sequence data
H Alexander, BD Jenkins, TA Rynearson, MA Saito, ML Mercier, ...
Frontiers in microbiology 3, 385, 2012
222012
Conserved transcriptional responses to nutrient stress in bloom-forming algae
MJ Harke, AR Juhl, ST Haley, H Alexander, ST Dyhrman
Frontiers in microbiology 8, 1279, 2017
122017
Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes
LK Johnson, H Alexander, CT Brown
GigaScience 8 (4), giy158, 2019
112019
Phosphorus availability regulates intracellular nucleotides in marine eukaryotic phytoplankton
EB Kujawinski, K Longnecker, H Alexander, ST Dyhrman, CL Fiore, ...
Limnology and Oceanography Letters 2 (4), 119-129, 2017
82017
Integrating “big data” into aquatic ecology: Challenges and opportunities
JM Durden, JY Luo, H Alexander, AM Flanagan, L Grossmann
Limnology and Oceanography Bulletin 26 (4), 101-108, 2017
72017
Transcriptional response of the harmful raphidophyte Heterosigma akashiwo to nitrate and phosphate stress
ST Haley, H Alexander, AR Juhl, ST Dyhrman
Harmful algae 68, 258-270, 2017
62017
Shifting metabolic priorities among key protistan taxa within and below the euphotic zone
SK Hu, Z Liu, H Alexander, V Campbell, PE Connell, ST Dyhrman, ...
Environmental microbiology 20 (8), 2865-2879, 2018
52018
Keeping it light:(Re) analyzing community-wide datasets without major infrastructure
H Alexander, LK Johnson, CT Brown
GigaScience 8 (2), giy159, 2019
42019
Transcriptional patterns identify resource controls on the diazotroph Trichodesmium in the Atlantic and Pacific oceans
M Rouco, KR Frischkorn, ST Haley, H Alexander, ST Dyhrman
The ISME journal 12 (6), 1486-1495, 2018
42018
Variable depth distribution of Trichodesmium clades in the North Pacific Ocean
M Rouco, ST Haley, H Alexander, ST Wilson, DM Karl, ST Dyhrman
Environmental microbiology reports 8 (6), 1058-1066, 2016
42016
Transcriptional shifts highlight the role of nutrients in harmful brown tide dynamics
L Wurch, H Alexander, KR Frischkorn, S Haley, C Gobler, S Dyhrman
Frontiers in microbiology 10, 136, 2019
32019
Defining the ecological and physiological traits of phytoplankton across marine ecosystem
H Alexander
Massachusetts Institute of Technology, 2016
22016
What are the type, direction, and strength of species, community, and ecosystem responses to warming in aquatic mesocosm studies and their dependency on experimental …
T Guy-Haim, H Alexander, TW Bell, RL Bier, LE Bortolotti, ...
Environmental Evidence 6 (1), 6, 2017
12017
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Articles 1–20