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John H Morris
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STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
D Szklarczyk, AL Gable, D Lyon, A Junge, S Wyder, J Huerta-Cepas, ...
Nucleic acids research 47 (D1), D607-D613, 2019
159042019
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
D Szklarczyk, JH Morris, H Cook, M Kuhn, S Wyder, M Simonovic, ...
Nucleic acids research, gkw937, 2016
72212016
UCSF ChimeraX: Structure visualization for researchers, educators, and developers
EF Pettersen, TD Goddard, CC Huang, EC Meng, GS Couch, TI Croll, ...
Protein science 30 (1), 70-82, 2021
64772021
UCSF ChimeraX: Meeting modern challenges in visualization and analysis
TD Goddard, CC Huang, EC Meng, EF Pettersen, GS Couch, JH Morris, ...
Protein science 27 (1), 14-25, 2018
42552018
Integration of biological networks and gene expression data using Cytoscape
MS Cline, M Smoot, E Cerami, A Kuchinsky, N Landys, C Workman, ...
Nature protocols 2 (10), 2366-2382, 2007
28212007
Genetic meta-analysis of diagnosed Alzheimer’s disease identifies new risk loci and implicates Aβ, tau, immunity and lipid processing
BW Kunkle, B Grenier-Boley, R Sims, JC Bis, V Damotte, AC Naj, ...
Nature genetics 51 (3), 414-430, 2019
25782019
Cytoscape StringApp: network analysis and visualization of proteomics data
NT Doncheva, JH Morris, J Gorodkin, LJ Jensen
Journal of proteome research 18 (2), 623-632, 2018
18042018
Cytoscape automation: empowering workflow-based network analysis
D Otasek, JH Morris, J Bouças, AR Pico, B Demchak
Genome biology 20, 1-15, 2019
12972019
UCSF ChimeraX: Tools for structure building and analysis
EC Meng, TD Goddard, EF Pettersen, GS Couch, ZJ Pearson, JH Morris, ...
Protein Science 32 (11), e4792, 2023
10922023
Biological network exploration with Cytoscape 3
G Su, JH Morris, B Demchak, GD Bader
Current protocols in bioinformatics 47 (1), 8.13. 1-8.13. 24, 2014
10102014
Global landscape of HIV–human protein complexes
S Jaeger, P Cimermancic, N Gulbahce, JR Johnson, KE McGovern, ...
Nature 481 (7381), 365-370, 2012
8282012
clusterMaker: a multi-algorithm clustering plugin for Cytoscape
JH Morris, L Apeltsin, AM Newman, J Baumbach, T Wittkop, G Su, ...
BMC bioinformatics 12, 1-14, 2011
6542011
Using sequence similarity networks for visualization of relationships across diverse protein superfamilies
HJ Atkinson, JH Morris, TE Ferrin, PC Babbitt
PloS one 4 (2), e4345, 2009
4992009
Effects of dronabinol on anorexia and disturbed behavior in patients with Alzheimer's disease
L Volicer, M Stelly, J Morris, J McLAUGHLIN, BJ Volicer
International journal of geriatric psychiatry 12 (9), 913-919, 1997
4921997
Imaging features and safety and efficacy of endovascular stroke treatment: a meta-analysis of individual patient-level data
L San Román, BK Menon, J Blasco, M Hernández-Pérez, A Dávalos, ...
The Lancet Neurology 17 (10), 895-904, 2018
3802018
Penumbral imaging and functional outcome in patients with anterior circulation ischaemic stroke treated with endovascular thrombectomy versus medical therapy: a meta-analysis …
BCV Campbell, CBLM Majoie, GW Albers, BK Menon, N Yassi, G Sharma, ...
The Lancet Neurology 18 (1), 46-55, 2019
3642019
GLay: community structure analysis of biological networks
G Su, A Kuchinsky, JH Morris, DJ States, F Meng
Bioinformatics 26 (24), 3135-3137, 2010
2742010
The structure–function linkage database
E Akiva, S Brown, DE Almonacid, AE Barber 2nd, AF Custer, MA Hicks, ...
Nucleic acids research 42 (D1), D521-D530, 2014
2692014
Randomized, double-blind, Phase 1 trial of an alphavirus replicon vaccine for cytomegalovirus in CMV seronegative adult volunteers
DI Bernstein, EA Reap, K Katen, A Watson, K Smith, P Norberg, ...
Vaccine 28 (2), 484-493, 2009
2602009
Effect of general anaesthesia on functional outcome in patients with anterior circulation ischaemic stroke having endovascular thrombectomy versus standard care: a meta …
BCV Campbell, WH Van Zwam, M Goyal, BK Menon, DWJ Dippel, ...
The Lancet Neurology 17 (1), 47-53, 2018
2572018
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