The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species KA Shefchek, NL Harris, M Gargano, N Matentzoglu, D Unni, M Brush, ... Nucleic acids research 48 (D1), D704-D715, 2020 | 219 | 2020 |
Characterizing long COVID: deep phenotype of a complex condition RR Deer, MA Rock, N Vasilevsky, L Carmody, H Rando, AJ Anzalone, ... EBioMedicine 74, 2021 | 186 | 2021 |
Mondo: Unifying diseases for the world, by the world NA Vasilevsky, NA Matentzoglu, S Toro, JE Flack IV, H Hegde, DR Unni, ... MedRxiv, 2022.04. 13.22273750, 2022 | 61 | 2022 |
<? mode longauthoraffil?> The Human Phenotype Ontology in 2024: phenotypes around the world MA Gargano, N Matentzoglu, B Coleman, EB Addo-Lartey, ... Nucleic acids research 52 (D1), D1333-D1346, 2024 | 38 | 2024 |
NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study JT Reese, B Coleman, L Chan, H Blau, TJ Callahan, L Cappelletti, ... Virology journal 19 (1), 84, 2022 | 36 | 2022 |
The landscape of nutri-informatics: a review of current resources and challenges for integrative nutrition research L Chan, N Vasilevsky, A Thessen, J McMurry, M Haendel Database 2021, baab003, 2021 | 33 | 2021 |
Risk of new‐onset psychiatric sequelae of COVID‐19 in the early and late post‐acute phase B Coleman, E Casiraghi, H Blau, L Chan, MA Haendel, B Laraway, ... World Psychiatry 21 (2), 319, 2022 | 20 | 2022 |
Community approaches for integrating environmental exposures into human models of disease AE Thessen, CJ Grondin, RD Kulkarni, S Brander, L Truong, ... Environmental health perspectives 128 (12), 125002, 2020 | 19 | 2020 |
A method for comparing multiple imputation techniques: a case study on the US national COVID cohort collaborative E Casiraghi, R Wong, M Hall, B Coleman, M Notaro, MD Evans, ... Journal of biomedical informatics 139, 104295, 2023 | 16* | 2023 |
Metformin is associated with reduced COVID-19 severity in patients with prediabetes LE Chan, E Casiraghi, B Laraway, B Coleman, H Blau, A Zaman, ... Diabetes research and clinical practice 194, 110157, 2022 | 15 | 2022 |
The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species TE Putman, K Schaper, N Matentzoglu, VP Rubinetti, FS Alquaddoomi, ... Nucleic acids research 52 (D1), D938-D949, 2024 | 13 | 2024 |
Cyclooxygenase inhibitor use is associated with increased COVID-19 severity J Reese, B Coleman, L Chan, JC Tiffany, L Cappelletti, T Fontana, ... | 13 | 2021 |
Characterizing long COVID: deep phenotype of a complex condition. EBioMedicine. 2021; 74: 103722 RR Deer, MA Rock, N Vasilevsky, L Carmody, H Rando, AJ Anzalone, ... Epub 2021/11/29. doi: 10.1016/j. ebiom. 2021.103722. PubMed PMID: 34839263, 2021 | 12 | 2021 |
Establishing a common nutritional vocabulary-from food production to diet L Andrés-Hernández, K Blumberg, RL Walls, D Dooley, R Mauleon, ... Frontiers in nutrition 9, 928837, 2022 | 11 | 2022 |
Characterizing long COVID: Deep phenotype of a complex condition. eBioMedicine 74 RR Deer, MA Rock, N Vasilevsky, L Carmody, H Rando, AJ Anzalone, ... | 11 | 2021 |
The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): connecting toxicology and exposure to human health and beyond LE Chan, AE Thessen, WD Duncan, N Matentzoglu, C Schmitt, ... Journal of biomedical semantics 14 (1), 3, 2023 | 9 | 2023 |
Food process ontology requirements D Dooley, M Weber, L Ibanescu, M Lange, L Chan, L Soldatova, C Yang, ... Semantic Web, 1-32, 2022 | 9 | 2022 |
KG-Hub—building and exchanging biological knowledge graphs JH Caufield, T Putman, K Schaper, DR Unni, H Hegde, TJ Callahan, ... Bioinformatics 39 (7), btad418, 2023 | 8 | 2023 |
Obo foundry food ontology interconnectivity D Dooley, L Andrés-Hernández, G Bordea, L Carmody, D Cavalieri, ... Semantic Web, 1-20, 2021 | 8 | 2021 |
Who is pregnant? Defining real-world data-based pregnancy episodes in the National COVID Cohort Collaborative (N3C) SE Jones, KR Bradwell, LE Chan, JA McMurry, C Olson-Chen, J Tarleton, ... JAMIA open 6 (3), ooad067, 2023 | 7 | 2023 |