Jan Van de Velde
Jan Van de Velde
Biocartis NV
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TF2Network: predicting transcription factor regulators and gene regulatory networks in Arabidopsis using publicly available binding site information
SR Kulkarni, D Vaneechoutte, J Van de Velde, K Vandepoele
Nucleic acids research 46 (6), e31-e31, 2018
A Functional and Evolutionary Perspective on Transcription Factor Binding in Arabidopsis thaliana
KS Heyndrickx, JV de Velde, C Wang, D Weigel, K Vandepoele
The Plant Cell 26 (10), 3894-3910, 2014
A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana
S Lindemose, MK Jensen, JV de Velde, C O'Shea, KS Heyndrickx, ...
Nucleic acids research 42 (12), 7681-7693, 2014
KIRA1 and ORESARA1 terminate flower receptivity by promoting cell death in the stigma of Arabidopsis
Z Gao, A Daneva, Y Salanenka, M Van Durme, M Huysmans, Z Lin, ...
Nature plants 4 (6), 365-375, 2018
Inference of Transcriptional Networks in Arabidopsis through Conserved Noncoding Sequence Analysis
JV de Velde, KS Heyndrickx, K Vandepoele
The Plant Cell 26 (7), 2729-2745, 2014
The Transcription Factor MYB29 Is a Regulator of ALTERNATIVE OXIDASE1a
X Zhang, A Ivanova, K Vandepoele, J Radomiljac, J Van de Velde, ...
Plant Physiology 173 (3), 1824-1843, 2017
Functional Analysis of the Arabidopsis TETRASPANIN Gene Family in Plant Growth and Development
F Wang, A Muto, J Van de Velde, P Neyt, K Himanen, K Vandepoele, ...
Plant physiology 169 (3), 2200-2214, 2015
Selection for improved energy use efficiency and drought tolerance in canola results in distinct transcriptome and epigenome changes
A Verkest, M Byzova, C Martens, P Willems, T Verwulgen, B Slabbinck, ...
Plant physiology 168 (4), 1338-1350, 2015
Integrative inference of transcriptional networks in Arabidopsis yields novel ROS signalling regulators
I De Clercq, J Van de Velde, X Luo, L Liu, V Storme, M Van Bel, R Pottie, ...
Nature Plants 7 (4), 500-513, 2021
Understanding genetic control of root system architecture in soybean: Insights into the genetic basis of lateral root number
SJ Prince, B Valliyodan, H Ye, M Yang, S Tai, W Hu, M Murphy, ...
Plant, cell & environment 42 (1), 212-229, 2019
A collection of conserved noncoding sequences to study gene regulation in flowering plants
J Van de Velde, M Van Bel, D Vaneechoutte, K Vandepoele
Plant Physiology 171 (4), 2586-2598, 2016
BLSSpeller: exhaustive comparative discovery of conserved cis-regulatory elements
D De Witte, J Van de Velde, D Decap, M Van Bel, P Audenaert, ...
Bioinformatics 31 (23), 3758-3766, 2015
Detection of microsatellite instability (MSI) in colorectal cancer samples with a novel set of highly sensitive markers by means of the Idylla MSI Test prototype.
B De Craene, J Van de Velde, E Rondelez, L Vandenbroeck, K Peeters, ...
Journal of Clinical Oncology 36 (15_suppl), e15639-e15639, 2018
Detection of microsatellite instability (MSI) with a novel set of 7 Idylla biomarkers on colorectal cancer samples in a multi-center study
B De Craene, J Van de Velde, E Bellon, M Gazin, E Rondelez, ...
Annals of Oncology 29 (suppl_8), mdy269. 160, 2018
Comparative motif discovery in the cloud
D De Witte, J Van de Velde, M Van Bel, P Audenaert, P Demeester, ...
Benelux Bioinformatics Conference 2013, 2013
Methods for the analysis of dissociation melt curve data
B De Craene, K DeCanniere, J Van De Velde
US Patent App. 16/767,967, 2021
The Idylla MSI Test (CE-IVD) multi-center concordance study: Microsatellite instability detection in colorectal cancer samples.
P Pauwels, T Steiniche, M Gazin, J Van de Velde, E Bellon, E Rondelez, ...
Journal of Clinical Oncology 37 (15_suppl), e15112-e15112, 2019
Biomarker panel and methods for detecting microsatellite instability in cancers
B De Craene, K DeCanniere, J Van De Velde, G Maertens
US Patent App. 18/332,648, 2024
Biomarker panel and methods for detecting microsatellite instability in cancers
B De Craene, K DeCanniere, J Van De Velde, G Maertens
US Patent 11,713,488, 2023
Method and genetic signature for detecting increased tumor mutational burden
J Van De Velde, B De Craene, AK Zwolinska, H Zhao, D Lambrechts, ...
US Patent App. 17/621,552, 2023
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