| Inference of network dynamics and metabolic interactions in the gut microbiome SN Steinway, MB Biggs, TP Loughran Jr, JA Papin, R Albert PLoS computational biology 11 (6), e1004338, 2015 | 142 | 2015 |
| Metabolic network modeling of microbial communities MB Biggs, GL Medlock, GL Kolling, JA Papin Wiley Interdisciplinary Reviews: Systems Biology and Medicine 7 (5), 317-334, 2015 | 116 | 2015 |
| Novel multiscale modeling tool applied to Pseudomonas aeruginosa biofilm formation MB Biggs, JA Papin PLoS One 8 (10), e78011, 2013 | 82 | 2013 |
| Systems-level metabolism of the altered Schaedler flora, a complete gut microbiota MB Biggs, GL Medlock, TJ Moutinho, HJ Lees, JR Swann, GL Kolling, ... The ISME journal 11 (2), 426-438, 2017 | 75 | 2017 |
| Rhizobial plasmids that cause impaired symbiotic nitrogen fixation and enhanced host invasion MB Crook, DP Lindsay, MB Biggs, JS Bentley, JC Price, SC Clement, ... Molecular plant-microbe interactions 25 (8), 1026-1033, 2012 | 70 | 2012 |
| Managing uncertainty in metabolic network structure and improving predictions using EnsembleFBA MB Biggs, JA Papin PLoS computational biology 13 (3), e1005413, 2017 | 48 | 2017 |
| Novel co-culture plate enables growth dynamic-based assessment of contact-independent microbial interactions TJ Moutinho Jr, JC Panagides, MB Biggs, GL Medlock, GL Kolling, ... PLoS One 12 (8), e0182163, 2017 | 33 | 2017 |
| Growth-altering microbial interactions are responsive to chemical context A Liu, AM Archer, MB Biggs, JA Papin PLoS One 12 (3), e0164919, 2017 | 18 | 2017 |
| Enhancing microbiome research through genome-scale metabolic modeling NYD Ankrah, DB Bernstein, M Biggs, M Carey, M Engevik, ... MSystems 6 (6), e00599-21, 2021 | 17 | 2021 |
| Metabolic network-guided binning of metagenomic sequence fragments MB Biggs, JA Papin Bioinformatics 32 (6), 867-874, 2016 | 16 | 2016 |
| Enhancing Microbiome Research through Genome-Scale Metabolic Modeling. mSystems 6: e00599-21 NYD Ankrah, DB Bernstein, M Biggs, M Carey, M Engevik, ... | 6 | 2021 |
| Diverse environmental bacteria displaying activity against Phakopsora pachyrhizi, the cause of soybean rust M Twizeyimana, PE Hammer, E Gachango, K Craig, B Espejo, MB Biggs, ... Frontiers in Plant Science 14, 1080116, 2023 | 5 | 2023 |
| Genomics-and machine learning-accelerated discovery of biocontrol bacteria MB Biggs, K Craig, E Gachango, D Ingham, M Twizeyimana Phytobiomes Journal 5 (4), 452-463, 2021 | 5 | 2021 |
| Optimizing the strain engineering process for industrial-scale production of bio-based molecules E Abbate, J Andrion, A Apel, M Biggs, J Chaves, K Cheung, A Ciesla, ... Journal of Industrial Microbiology and Biotechnology 50 (1), kuad025, 2023 | 2 | 2023 |
| Enabling the Bioeconomy with the GenoscalerTM Platform J Andrion, AR Apel, M Biggs, K Cheung, A Ciesla, R Contridas, G Hein, ... Metabolic Engineering 15, 2023 | | 2023 |
| Compositions and methods for controlling undesirable microbes and improving animal health MB Biggs, JM Kremer, V Beilinson, DM Gangaiah, K Craig US Patent App. 17/793,249, 2023 | | 2023 |
| Genomics-accelerated discovery of diverse fungicidal bacteria MB Biggs, K Craig, E Gachango, D Ingham, M Twizeyimana bioRxiv, 2020.10. 16.343004, 2020 | | 2020 |
| Biological control of black Sigatoka in bananas and plantains in Sub-Saharan Africa M Twizeyimana, AE Alakonya, E Gachango, K McCorkle, D Ingham, ... Plant Health 2019, 2019 | | 2019 |
| Biological control of sorghum anthracnose in Sub-Saharan Africa E Gachango, M Biruma, K McCorkle, M Twizeyimana, D Ingham, K Craig, ... Plant Health 2019, 2019 | | 2019 |
| Growth-Altering Microbial Interactions Are Highly Sensitive to Environmental Context A Liu, A Archer, MB Biggs, JA Papin bioRxiv, 079251, 2016 | | 2016 |
