Sam Abbott
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Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts
J Hellewell, S Abbott, A Gimma, NI Bosse, CI Jarvis, TW Russell, ...
The Lancet Global Health 8 (4), e488-e496, 2020
19452020
Estimated transmissibility and impact of SARS-CoV-2 lineage B. 1.1. 7 in England
NG Davies, S Abbott, RC Barnard, CI Jarvis, AJ Kucharski, JD Munday, ...
Science 372 (6538), 2021
1007*2021
Estimating the infection and case fatality ratio for coronavirus disease (COVID-19) using age-adjusted data from the outbreak on the Diamond Princess cruise ship, February 2020
TW Russell, J Hellewell, CI Jarvis, K Van Zandvoort, S Abbott, ...
Eurosurveillance 25 (12), 2000256, 2020
4502020
Estimating the overdispersion in COVID-19 transmission using outbreak sizes outside China [version 3; peer review: 2
A Endo, S Abbott, AJ Kucharski, S Funk
333*2020
Practical considerations for measuring the effective reproductive number, Rt
KM Gostic, L McGough, EB Baskerville, S Abbott, K Joshi, C Tedijanto, ...
PLoS computational biology 16 (12), e1008409, 2020
1732020
Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts
S Abbott, J Hellewell, RN Thompson, K Sherratt, HP Gibbs, NI Bosse, ...
Wellcome Open Research 5 (112), 112, 2020
1292020
Reconstructing the early global dynamics of under-ascertained COVID-19 cases and infections
TW Russell, N Golding, J Hellewell, S Abbott, L Wright, CAB Pearson, ...
BMC medicine 18 (1), 1-9, 2020
92*2020
Incarceration history and risk of HIV and hepatitis C virus acquisition among people who inject drugs: a systematic review and meta-analysis
J Stone, H Fraser, AG Lim, JG Walker, Z Ward, L MacGregor, A Trickey, ...
The Lancet infectious diseases 18 (12), 1397-1409, 2018
912018
Adoption and impact of non-pharmaceutical interventions for COVID-19
N Imai, KAM Gaythorpe, S Abbott, S Bhatia, S van Elsland, K Prem, Y Liu, ...
Wellcome Open Research 5, 2020
752020
The impact of population-wide rapid antigen testing on SARS-CoV-2 prevalence in Slovakia
M Pavelka, K Van-Zandvoort, S Abbott, K Sherratt, M Majdan, C COVID, ...
Science 372 (6542), 635-641, 2021
68*2021
The transmissibility of novel Coronavirus in the early stages of the 2019-20 outbreak in Wuhan: Exploring initial point-source exposure sizes and durations using scenario analysis
S Abbott, J Hellewell, J Munday, S Funk, CMMID nCoV working group
Wellcome open research 5, 2020
672020
Early analysis of the Australian COVID-19 epidemic
DJ Price, FM Shearer, MT Meehan, E McBryde, R Moss, N Golding, ...
Elife 9, e58785, 2020
352020
Inferring the number of COVID-19 cases from recently reported deaths
T Jombart, K Van Zandvoort, TW Russell, CI Jarvis, A Gimma, S Abbott, ...
Wellcome Open Research 5, 2020
352020
Invasive versus non-invasive management of older patients with non-ST elevation myocardial infarction (SENIOR-NSTEMI): a cohort study based on routine clinical data
A Kaura, JAC Sterne, A Trickey, S Abbott, A Mulla, B Glampson, ...
The Lancet 396 (10251), 623-634, 2020
252020
Estimating number of cases and spread of coronavirus disease (COVID-19) using critical care admissions, United Kingdom, February to March 2020
M Jit, T Jombart, ES Nightingale, A Endo, S Abbott, WJ Edmunds
Eurosurveillance 25 (18), 2000632, 2020
232020
Contact tracing is an imperfect tool for controlling COVID-19 transmission and relies on population adherence
EL Davis, TCD Lucas, A Borlase, TM Pollington, S Abbott, D Ayabina, ...
Nature communications 12 (1), 1-8, 2021
15*2021
EpiNow2: Estimate real-time case counts and time-varying epidemiological parameters. 2020
S Abbott, J Hellewell, J Hickson, J Munday, K Gostic, P Ellis
R package version 0.1. 0, 0
12*
Exploring surveillance data biases when estimating the reproduction number: with insights into subpopulation transmission of COVID-19 in England
K Sherratt, S Abbott, SR Meakin, J Hellewell, JD Munday, N Bosse, ...
Philosophical Transactions of the Royal Society B 376 (1829), 20200283, 2021
9*2021
Implications of the school-household network structure on SARS-CoV-2 transmission under different school reopening strategies in England
JD Munday, K Sherratt, S Meakin, A Endo, CAB Pearson, J Hellewell, ...
medRxiv, 2020
92020
Exploring the effects of BCG vaccination in patients diagnosed with tuberculosis: observational study using the Enhanced Tuberculosis Surveillance system
S Abbott, H Christensen, MK Lalor, D Zenner, C Campbell, ME Ramsay, ...
Vaccine 37 (35), 5067-5072, 2019
92019
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