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Ryan Lister
Ryan Lister
University of Western Australia; Harry Perkins Institute of Medical Research
Verified email at uwa.edu.au - Homepage
Title
Cited by
Cited by
Year
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
51082015
Human DNA methylomes at base resolution show widespread epigenomic differences
R Lister, M Pelizzola, RH Dowen, RD Hawkins, G Hon, J Tonti-Filippini, ...
nature 462 (7271), 315-322, 2009
47442009
Highly integrated single-base resolution maps of the epigenome in Arabidopsis
R Lister, RC O'Malley, J Tonti-Filippini, BD Gregory, CC Berry, AH Millar, ...
Cell 133 (3), 523-536, 2008
25892008
Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells
R Lister, M Pelizzola, YS Kida, RD Hawkins, JR Nery, G Hon, ...
Nature 471 (7336), 68-73, 2011
16912011
Global epigenomic reconfiguration during mammalian brain development
R Lister, EA Mukamel, JR Nery, M Urich, CA Puddifoot, ND Johnson, ...
Science 341 (6146), 1237905, 2013
16792013
Widespread dynamic DNA methylation in response to biotic stress
RH Dowen, M Pelizzola, RJ Schmitz, R Lister, JM Dowen, JR Nery, ...
Proceedings of the National Academy of Sciences 109 (32), E2183-E2191, 2012
9102012
Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells
WA Pastor, UJ Pape, Y Huang, HR Henderson, R Lister, M Ko, ...
Nature 473 (7347), 394-397, 2011
8902011
Distinct epigenomic landscapes of pluripotent and lineage-committed human cells
RD Hawkins, GC Hon, LK Lee, QM Ngo, R Lister, M Pelizzola, LE Edsall, ...
Cell stem cell 6 (5), 479-491, 2010
8872010
Genome evolution in the allotetraploid frog Xenopus laevis
AM Session, Y Uno, T Kwon, JA Chapman, A Toyoda, S Takahashi, ...
Nature 538 (7625), 336-343, 2016
7402016
Epigenomic analysis of multilineage differentiation of human embryonic stem cells
W Xie, MD Schultz, R Lister, Z Hou, N Rajagopal, P Ray, JW Whitaker, ...
Cell 153 (5), 1134-1148, 2013
7042013
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
RA Harris, T Wang, C Coarfa, RP Nagarajan, C Hong, SL Downey, ...
Nature biotechnology 28 (10), 1097-1105, 2010
6912010
Epigenomic signatures of neuronal diversity in the mammalian brain
A Mo, EA Mukamel, FP Davis, C Luo, GL Henry, S Picard, MA Urich, ...
Neuron 86 (6), 1369-1384, 2015
5422015
Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer
GC Hon, RD Hawkins, OL Caballero, C Lo, R Lister, M Pelizzola, ...
Genome research 22 (2), 246-258, 2012
5122012
A link between RNA metabolism and silencing affecting Arabidopsis development
BD Gregory, RC O'Malley, R Lister, MA Urich, J Tonti-Filippini, H Chen, ...
Developmental cell 14 (6), 854-866, 2008
4232008
A single-cell atlas of entorhinal cortex from individuals with Alzheimer’s disease reveals cell-type-specific gene expression regulation
A Grubman, G Chew, JF Ouyang, G Sun, XY Choo, C McLean, ...
Nature neuroscience 22 (12), 2087-2097, 2019
4152019
Finding the fifth base: genome-wide sequencing of cytosine methylation
R Lister, JR Ecker
Genome research 19 (6), 959-966, 2009
4132009
Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana
R Clifton, R Lister, KL Parker, PG Sappl, D Elhafez, AH Millar, DA Day, ...
Plant molecular biology 58 (2), 193-212, 2005
3682005
Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond
R Lister, BD Gregory, JR Ecker
Current opinion in plant biology 12 (2), 107-118, 2009
3552009
Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements
D Secco, C Wang, H Shou, MD Schultz, S Chiarenza, L Nussaume, ...
elife 4, e09343, 2015
2812015
The Arabidopsis glutathione transferase gene family displays complex stress regulation and co‐silencing multiple genes results in altered metabolic sensitivity to oxidative stress
PG Sappl, AJ Carroll, R Clifton, R Lister, J Whelan, A Harvey Millar, ...
The Plant Journal 58 (1), 53-68, 2009
2662009
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