Ryan Lister
Ryan Lister
The University of Western Australia; Harry Perkins Institute of Medical Research
Verified email at uwa.edu.au - Homepage
Title
Cited by
Cited by
Year
Human DNA methylomes at base resolution show widespread epigenomic differences
R Lister, M Pelizzola, RH Dowen, RD Hawkins, G Hon, J Tonti-Filippini, ...
nature 462 (7271), 315-322, 2009
43762009
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
43222015
Highly integrated single-base resolution maps of the epigenome in Arabidopsis
R Lister, RC O'Malley, J Tonti-Filippini, BD Gregory, CC Berry, AH Millar, ...
Cell 133 (3), 523-536, 2008
24102008
Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells
R Lister, M Pelizzola, YS Kida, RD Hawkins, JR Nery, G Hon, ...
Nature 471 (7336), 68-73, 2011
16142011
Global epigenomic reconfiguration during mammalian brain development
R Lister, EA Mukamel, JR Nery, M Urich, CA Puddifoot, ND Johnson, ...
Science 341 (6146), 2013
14942013
Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells
WA Pastor, UJ Pape, Y Huang, HR Henderson, R Lister, M Ko, ...
Nature 473 (7347), 394-397, 2011
8392011
Widespread dynamic DNA methylation in response to biotic stress
RH Dowen, M Pelizzola, RJ Schmitz, R Lister, JM Dowen, JR Nery, ...
Proceedings of the National Academy of Sciences 109 (32), E2183-E2191, 2012
8012012
Distinct epigenomic landscapes of pluripotent and lineage-committed human cells
RD Hawkins, GC Hon, LK Lee, QM Ngo, R Lister, M Pelizzola, LE Edsall, ...
Cell stem cell 6 (5), 479-491, 2010
8002010
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
RA Harris, T Wang, C Coarfa, RP Nagarajan, C Hong, SL Downey, ...
Nature biotechnology 28 (10), 1097-1105, 2010
6642010
Epigenomic analysis of multilineage differentiation of human embryonic stem cells
W Xie, MD Schultz, R Lister, Z Hou, N Rajagopal, P Ray, JW Whitaker, ...
Cell 153 (5), 1134-1148, 2013
6462013
Genome evolution in the allotetraploid frog Xenopus laevis
AM Session, Y Uno, T Kwon, JA Chapman, A Toyoda, S Takahashi, ...
Nature 538 (7625), 336-343, 2016
5692016
Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer
GC Hon, RD Hawkins, OL Caballero, C Lo, R Lister, M Pelizzola, ...
Genome research 22 (2), 246-258, 2012
4732012
Epigenomic signatures of neuronal diversity in the mammalian brain
A Mo, EA Mukamel, FP Davis, C Luo, GL Henry, S Picard, MA Urich, ...
Neuron 86 (6), 1369-1384, 2015
4432015
A link between RNA metabolism and silencing affecting Arabidopsis development
BD Gregory, RC O'Malley, R Lister, MA Urich, J Tonti-Filippini, H Chen, ...
Developmental cell 14 (6), 854-866, 2008
3942008
Finding the fifth base: genome-wide sequencing of cytosine methylation
R Lister, JR Ecker
Genome research 19 (6), 959-966, 2009
3822009
Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond
R Lister, BD Gregory, JR Ecker
Current opinion in plant biology 12 (2), 107-118, 2009
3452009
Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana
R Clifton, R Lister, KL Parker, PG Sappl, D Elhafez, AH Millar, DA Day, ...
Plant molecular biology 58 (2), 193-212, 2005
3382005
The Arabidopsis glutathione transferase gene family displays complex stress regulation and co‐silencing multiple genes results in altered metabolic sensitivity to oxidative stress
PG Sappl, AJ Carroll, R Clifton, R Lister, J Whelan, A Harvey Millar, ...
The Plant Journal 58 (1), 53-68, 2009
2422009
Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements
D Secco, C Wang, H Shou, MD Schultz, S Chiarenza, L Nussaume, ...
elife 4, e09343, 2015
2312015
A single-cell atlas of entorhinal cortex from individuals with Alzheimer’s disease reveals cell-type-specific gene expression regulation
A Grubman, G Chew, JF Ouyang, G Sun, XY Choo, C McLean, ...
Nature neuroscience 22 (12), 2087-2097, 2019
2242019
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