| NIH Image to ImageJ: 25 years of image analysis CA Schneider, WS Rasband, KW Eliceiri Nature methods 9 (7), 671-675, 2012 | 32839 | 2012 |
| Fiji: an open-source platform for biological-image analysis J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ... Nature methods 9 (7), 676-682, 2012 | 26606 | 2012 |
| ImageJ2: ImageJ for the next generation of scientific image data CT Rueden, J Schindelin, MC Hiner, BE DeZonia, AE Walter, ET Arena, ... BMC bioinformatics 18 (1), 1-26, 2017 | 2464 | 2017 |
| The ImageJ ecosystem: An open platform for biomedical image analysis J Schindelin, CT Rueden, MC Hiner, KW Eliceiri Molecular reproduction and development 82 (7-8), 518-529, 2015 | 1718 | 2015 |
| Collagen reorganization at the tumor-stromal interface facilitates local invasion PP Provenzano, KW Eliceiri, JM Campbell, DR Inman, JG White, PJ Keely BMC medicine 4 (1), 1-15, 2006 | 1356 | 2006 |
| Collagen density promotes mammary tumor initiation and progression PP Provenzano, DR Inman, KW Eliceiri, JG Knittel, L Yan, CT Rueden, ... BMC medicine 6 (1), 1-15, 2008 | 1126 | 2008 |
| TrackMate: An open and extensible platform for single-particle tracking JY Tinevez, N Perry, J Schindelin, GM Hoopes, GD Reynolds, ... Methods 115, 80-90, 2017 | 1106 | 2017 |
| Aligned collagen is a prognostic signature for survival in human breast carcinoma MW Conklin, JC Eickhoff, KM Riching, CA Pehlke, KW Eliceiri, ... The American journal of pathology 178 (3), 1221-1232, 2011 | 874 | 2011 |
| Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification I Arganda-Carreras, V Kaynig, C Rueden, KW Eliceiri, J Schindelin, ... Bioinformatics 33 (15), 2424-2426, 2017 | 864 | 2017 |
| In vivo multiphoton microscopy of NADH and FAD redox states, fluorescence lifetimes, and cellular morphology in precancerous epithelia MC Skala, KM Riching, A Gendron-Fitzpatrick, J Eickhoff, KW Eliceiri, ... Proceedings of the National Academy of Sciences 104 (49), 19494-19499, 2007 | 853 | 2007 |
| Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software L Kamentsky, TR Jones, A Fraser, MA Bray, DJ Logan, KL Madden, ... Bioinformatics 27 (8), 1179-1180, 2011 | 840 | 2011 |
| Matrix density-induced mechanoregulation of breast cell phenotype, signaling and gene expression through a FAK–ERK linkage PP Provenzano, DR Inman, KW Eliceiri, PJ Keely Oncogene 28 (49), 4326-4343, 2009 | 572 | 2009 |
| Metadata matters: access to image data in the real world M Linkert, CT Rueden, C Allan, JM Burel, W Moore, A Patterson, ... Journal of Cell Biology 189 (5), 777-782, 2010 | 566 | 2010 |
| Biological imaging software tools KW Eliceiri, MR Berthold, IG Goldberg, L Ibáñez, BS Manjunath, ... Nature methods 9 (7), 697, 2012 | 510 | 2012 |
| Contact guidance mediated three-dimensional cell migration is regulated by Rho/ROCK-dependent matrix reorganization PP Provenzano, DR Inman, KW Eliceiri, SM Trier, PJ Keely Biophysical journal 95 (11), 5374-5384, 2008 | 458 | 2008 |
| Metabolic mapping of MCF10A human breast cells via multiphoton fluorescence lifetime imaging of the coenzyme NADH DK Bird, L Yan, KM Vrotsos, KW Eliceiri, EM Vaughan, PJ Keely, JG White, ... Cancer research 65 (19), 8766-8773, 2005 | 356 | 2005 |
| In vivo multiphoton fluorescence lifetime imaging of protein-bound and free nicotinamide adenine dinucleotide in normal and precancerous epithelia MC Skala, KM Riching, DK Bird, A Gendron-Fitzpatrick, J Eickhoff, ... Journal of biomedical optics 12 (2), 024014, 2007 | 316 | 2007 |
| Postpartum mammary gland involution drives progression of ductal carcinoma in situ through collagen and COX-2 TR Lyons, J O'brien, VF Borges, MW Conklin, PJ Keely, KW Eliceiri, ... Nature medicine 17 (9), 1109-1115, 2011 | 308 | 2011 |
| The collagen receptor discoidin domain receptor 2 stabilizes SNAIL1 to facilitate breast cancer metastasis K Zhang, CA Corsa, SM Ponik, JL Prior, D Piwnica-Worms, KW Eliceiri, ... Nature cell biology 15 (6), 677-687, 2013 | 297 | 2013 |
| Multiphoton microscopy of endogenous fluorescence differentiates normal, precancerous, and cancerous squamous epithelial tissues MC Skala, JM Squirrell, KM Vrotsos, JC Eickhoff, A Gendron-Fitzpatrick, ... Cancer research 65 (4), 1180-1186, 2005 | 270 | 2005 |
