| In silico labeling: predicting fluorescent labels in unlabeled images EM Christiansen, SJ Yang, DM Ando, A Javaherian, G Skibinski, S Lipnick, ... Cell 173 (3), 792-803. e19, 2018 | 581 | 2018 |
| Autophagy induction enhances TDP43 turnover and survival in neuronal ALS models SJ Barmada, A Serio, A Arjun, B Bilican, A Daub, DM Ando, A Tsvetkov, ... Nature chemical biology 10 (8), 677-685, 2014 | 445 | 2014 |
| Astrocyte pathology and the absence of non-cell autonomy in an induced pluripotent stem cell model of TDP-43 proteinopathy A Serio, B Bilican, SJ Barmada, DM Ando, C Zhao, R Siller, K Burr, ... Proceedings of the National Academy of Sciences 110 (12), 4697-4702, 2013 | 392 | 2013 |
| Proteostasis of polyglutamine varies among neurons and predicts neurodegeneration AS Tsvetkov, M Arrasate, S Barmada, DM Ando, P Sharma, BA Shaby, ... Nature chemical biology 9 (9), 586-592, 2013 | 186 | 2013 |
| Assessing microscope image focus quality with deep learning SJ Yang, M Berndl, D Michael Ando, M Barch, A Narayanaswamy, ... BMC bioinformatics 19, 1-9, 2018 | 159 | 2018 |
| Nrf2 mitigates LRRK2-and α-synuclein–induced neurodegeneration by modulating proteostasis G Skibinski, V Hwang, DM Ando, A Daub, AK Lee, A Ravisankar, ... Proceedings of the National Academy of Sciences 114 (5), 1165-1170, 2017 | 111 | 2017 |
| The RNA-binding Protein TDP-43 Selectively Disrupts MicroRNA-1/206 Incorporation into the RNA-induced Silencing Complex*♦ IN King, V Yartseva, D Salas, A Kumar, A Heidersbach, DM Ando, ... Journal of Biological Chemistry 289 (20), 14263-14271, 2014 | 86 | 2014 |
| Improving phenotypic measurements in high-content imaging screens DM Ando, CY McLean, M Berndl BioRxiv, 161422, 2017 | 77 | 2017 |
| No difference in kinetics of tau or histone phosphorylation by CDK5/p25 versus CDK5/p35 in vitro DW Peterson, DM Ando, DA Taketa, H Zhou, FW Dahlquist, J Lew Proceedings of the National Academy of Sciences 107 (7), 2884-2889, 2010 | 63 | 2010 |
| High-throughput screening in primary neurons P Sharma, DM Ando, A Daub, JA Kaye, S Finkbeiner Methods in enzymology 506, 331-360, 2012 | 59 | 2012 |
| A machine learning approach to define antimalarial drug action from heterogeneous cell-based screens GW Ashdown, M Dimon, M Fan, F Sánchez-Román Terán, K Witmer, ... Science advances 6 (39), eaba9338, 2020 | 40 | 2020 |
| Morphological profiling of tubercle bacilli identifies drug pathways of action TC Smith, KM Pullen, MC Olson, ME McNellis, I Richardson, S Hu, ... Proceedings of the National Academy of Sciences 117 (31), 18744-18753, 2020 | 30 | 2020 |
| JUMP Cell Painting dataset: morphological impact of 136,000 chemical and genetic perturbations SN Chandrasekaran, J Ackerman, E Alix, DM Ando, J Arevalo, M Bennion, ... Biorxiv, 2023.03. 23.534023, 2023 | 28 | 2023 |
| Automated robotic microscopy systems SM Finkbeiner, DM Ando, AC Daub US Patent 10,474,920, 2019 | 23 | 2019 |
| Automated detection and staging of malaria parasites from cytological smears using convolutional neural networks MS Davidson, C Andradi-Brown, S Yahiya, J Chmielewski, AJ O’Donnell, ... Biological imaging 1, e2, 2021 | 22 | 2021 |
| Applying deep neural network analysis to high-content image-based assays SJ Yang, SL Lipnick, NR Makhortova, S Venugopalan, M Fan, ... SLAS DISCOVERY: Advancing Life Sciences R&D 24 (8), 829-841, 2019 | 22 | 2019 |
| Batch equalization with a generative adversarial network WW Qian, C Xia, S Venugopalan, A Narayanaswamy, M Dimon, ... Bioinformatics 36 (Supplement_2), i875-i883, 2020 | 16 | 2020 |
| Physics-enhanced machine learning for virtual fluorescence microscopy CL Cooke, F Kong, A Chaware, KC Zhou, K Kim, R Xu, DM Ando, ... Proceedings of the IEEE/CVF International Conference on Computer Vision …, 2021 | 13 | 2021 |
| Longitudinal imaging and analysis of neurons expressing polyglutamine-expanded proteins AS Tsvetkov, DM Ando, S Finkbeiner Tandem Repeats in Genes, Proteins, and Disease: Methods and Protocols, 1-20, 2013 | 12 | 2013 |
| Analysis of perturbed subjects using semantic embeddings DM Ando, M Berndl, L Yang, M Dimon US Patent 10,769,501, 2020 | 9 | 2020 |
