Francesco Ferrari
Francesco Ferrari
IFOM, the FIRC Institute of Molecular Oncology and CNR, National Research Council
Verified email at - Homepage
Cited by
Cited by
A MicroRNA targeting dicer for metastasis control
G Martello, A Rosato, F Ferrari, A Manfrin, M Cordenonsi, S Dupont, ...
Cell 141 (7), 1195-1207, 2010
Hallmarks of pluripotency
A De Los Angeles, F Ferrari, R Xi, Y Fujiwara, N Benvenisty, H Deng, ...
Nature 525 (7570), 469-478, 2015
The Lkb1 metabolic sensor maintains haematopoietic stem cell survival
S Gurumurthy, SZ Xie, B Alagesan, J Kim, RZ Yusuf, B Saez, A Tzatsos, ...
Nature 468 (7324), 659-663, 2010
Comparative analysis of metazoan chromatin organization
JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ...
Nature 512 (7515), 449-452, 2014
Comparison of computational methods for Hi-C data analysis.
M Forcato, C Nicoletti, K Pal, CM Livi, F Ferrari, S Bicciato
Nature methods 14 (7), 679, 2017
Ascorbic acid prevents loss of Dlk1-Dio3 imprinting and facilitates generation of all-iPS cell mice from terminally differentiated B cells
M Stadtfeld, E Apostolou, F Ferrari, J Choi, RM Walsh, T Chen, SSK Ooi, ...
Nature genetics 44 (4), 398-405, 2012
High-dimensional single cell analysis identifies stem-like cytotoxic CD8+ T cells infiltrating human tumors
J Brummelman, EMC Mazza, G Alvisi, FS Colombo, A Grilli, J Mikulak, ...
Journal of Experimental Medicine 215 (10), 2520-2535, 2018
A comparison of genetically matched cell lines reveals the equivalence of human iPSCs and ESCs
J Choi, S Lee, W Mallard, K Clement, GM Tagliazucchi, H Lim, IY Choi, ...
Nature biotechnology, 2015
The histone chaperone CAF-1 safeguards somatic cell identity
S Cheloufi, U Elling, B Hopfgartner, YL Jung, J Murn, M Ninova, ...
Nature 528 (7581), 218-224, 2015
Genome-wide chromatin interactions of the Nanog locus in pluripotency, differentiation, and reprogramming
E Apostolou, F Ferrari, RM Walsh, O Bar-Nur, M Stadtfeld, S Cheloufi, ...
Cell stem cell 12 (6), 699-712, 2013
Impact of sequencing depth in ChIP-seq experiments
YL Jung, LJ Luquette, JWK Ho, F Ferrari, M Tolstorukov, A Minoda, ...
Nucleic acids research 42 (9), e74-e74, 2014
Transcriptional profiling in response to terminal drought stress reveals differential responses along the wheat genome
A Aprile, A Mastrangelo, A De Leonardis, G Galiba, E Roncaglia, F Ferrari, ...
BMC genomics 10 (1), 279, 2009
KDM2B promotes pancreatic cancer via Polycomb-dependent and-independent transcriptional programs
A Tzatsos, P Paskaleva, F Ferrari, V Deshpande, S Stoykova, G Contino, ...
The Journal of Clinical Investigation 123 (2), 727, 2013
Novel definition files for human GeneChips based on GeneAnnot
F Ferrari, S Bortoluzzi, A Coppe, A Sirota, M Safran, M Shmoish, S Ferrari, ...
BMC bioinformatics 8 (1), 446, 2007
Gene expression in grapevine cultivars in response to Bois Noir phytoplasma infection
G Albertazzi, J Milc, A Caffagni, E Francia, E Roncaglia, F Ferrari, ...
Plant Science 176 (6), 792-804, 2009
Comprehensive analysis of promoter-proximal RNA polymerase II pausing across mammalian cell types
DS Day, B Zhang, SM Stevens, F Ferrari, EN Larschan, PJ Park, WT Pu
Genome biology 17 (1), 120, 2016
Hi-C analysis: from data generation to integration
K Pal, M Forcato, F Ferrari
Biophysical reviews 11 (1), 67-78, 2019
Integrative genomics analyses reveal molecularly distinct subgroups of B-cell chronic lymphocytic leukemia patients with 13q14 deletion
L Mosca, S Fabris, M Lionetti, K Todoerti, L Agnelli, F Morabito, G Cutrona, ...
Clinical Cancer Research 16 (23), 5641-5653, 2010
Transcriptional control of a whole chromosome: emerging models for dosage compensation
F Ferrari, AA Alekseyenko, PJ Park, MI Kuroda
Nature Structural & Molecular Biology 21 (2), 118-125, 2014
The reconstruction of transcriptional networks reveals critical genes with implications for clinical outcome of multiple myeloma
L Agnelli, M Forcato, F Ferrari, G Tuana, K Todoerti, BA Walker, ...
Clinical Cancer Research 17 (23), 7402-7412, 2011
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