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Payal Chatterjee
Payal Chatterjee
Principal Scientist, Computational Chemistry, Cogent Biosciences
Geverifieerd e-mailadres voor cogentbio.com
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Can relative binding free energy predict selectivity of reversible covalent inhibitors?
P Chatterjee, WM Botello-Smith, H Zhang, L Qian, A Alsamarah, D Kent, ...
Journal of the American Chemical Society 139 (49), 17945-17952, 2017
492017
Molecular mechanism of resveratrol’s lipid membrane protection
Q Fei, D Kent, WM Botello-Smith, F Nur, S Nur, A Alsamarah, P Chatterjee, ...
Scientific reports 8 (1), 1587, 2018
462018
Ranking reversible covalent drugs: from free energy perturbation to fragment docking
H Zhang, W Jiang, P Chatterjee, Y Luo
Journal of chemical information and modeling 59 (5), 2093-2102, 2019
442019
CHARMM‐GUI Drude prepper for molecular dynamics simulation using the classical Drude polarizable force field
AA Kognole, J Lee, SJ Park, S Jo, P Chatterjee, JA Lemkul, J Huang, ...
Journal of computational chemistry 43 (5), 359-375, 2022
272022
Toward prediction of electrostatic parameters for force fields that explicitly treat electronic polarization
E Heid, M Fleck, P Chatterjee, C Schröder, AD MacKerell Jr
Journal of chemical theory and computation 15 (4), 2460-2469, 2019
272019
Harnessing deep learning for optimization of lennard-jones parameters for the polarizable classical drude oscillator force field
P Chatterjee, MY Sengul, A Kumar, AD MacKerell Jr
Journal of chemical theory and computation 18 (4), 2388-2407, 2022
192022
Deep neural network model to predict the electrostatic parameters in the polarizable classical Drude oscillator force field
A Kumar, P Pandey, P Chatterjee, AD MacKerell Jr
Journal of chemical theory and computation 18 (3), 1711-1725, 2022
172022
Effects of bioactive constituents in the Traditional Chinese Medicinal formula Si–Wu–Tang on Nrf2 signaling and neoplastic cellular transformation
MM Liu, KM Huang, L Qian, P Chatterjee, S Zhang, R Li, S Zhou, Z Wang, ...
Phytomedicine 40, 1-9, 2018
172018
The connexin26 human mutation N14K disrupts cytosolic intersubunit interactions and promotes channel opening
JM Valdez Capuccino, P Chatterjee, IE García, WM Botello-Smith, ...
Journal of General Physiology 151 (3), 328-341, 2019
162019
Polymodal allosteric regulation of Type 1 Serine/Threonine Kinase Receptors via a conserved electrostatic lock
WM Botello-Smith, A Alsamarah, P Chatterjee, C Xie, JJ Lacroix, J Hao, ...
PLoS Computational Biology 13 (8), e1005711, 2017
162017
Solvation dynamics: improved reproduction of the time-dependent Stokes shift with polarizable empirical force field chromophore models
E Heid, S Schmode, P Chatterjee, AD MacKerell, C Schröder
Physical Chemistry Chemical Physics 21 (32), 17703-17710, 2019
112019
Drude polarizable lipid force field with explicit treatment of long-range dispersion: Parametrization and validation for saturated and monounsaturated zwitterionic lipids
Y Yu, RM Venable, J Thirman, P Chatterjee, A Kumar, RW Pastor, B Roux, ...
Journal of Chemical Theory and Computation 19 (9), 2590-2605, 2023
102023
Overlapping structure features selection in linear and non-linear QSAR
M Ojha, M Yadav, A Nayarisseri, J Prajapati, N Pandey, P Chatterjee
journal of pharmacy research 6 (1), 183-187, 2013
42013
Cancer cell metabolism featuring Nrf2
P Chatterjee, M Yadav, N Chauhan, Y Huang, Y Luo
Current Drug Discovery Technologies 17 (3), 263-271, 2020
32020
A Nexus model of cellular transition in cancer
M Yadav, P Chatterjee, S Tolani, J Kulkarni, M Mulye, N Chauhan, ...
Biological Research 51 (1), 23, 2018
22018
Nitro-benzylideneoxymorphone, a bifunctional mu and delta opioid receptor ligand with high mu opioid receptor efficacy
KM Olson, AL Devereaux, P Chatterjee, SL Saldaña-Shumaker, A Shafer, ...
Frontiers in Pharmacology 14, 1230053, 2023
12023
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Artikelen 1–16