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Enio Gjerga
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From expression footprints to causal pathways: contextualizing large signaling networks with CARNIVAL
A Liu, P Trairatphisan, E Gjerga, A Didangelos, J Barratt, ...
NPJ systems biology and applications 5 (1), 1-10, 2019
632019
Causal integration of multi‐omics data with prior knowledge to generate mechanistic hypotheses
A Dugourd, C Kuppe, M Sciacovelli, E Gjerga, A Gabor, KB Emdal, ...
Molecular systems biology 17 (1), e9730, 2021
462021
Converting networks to predictive logic models from perturbation signalling data with CellNOpt
E Gjerga, P Trairatphisan, A Gabor, H Koch, C Chevalier, F Ceccarelli, ...
Bioinformatics 36 (16), 4523-4524, 2020
142020
Elucidating essential kinases of endothelin signalling by logic modelling of phosphoproteomics data
A Schäfer, E Gjerga, RWD Welford, I Renz, F Lehembre, PMA Groenen, ...
Molecular systems biology 15 (8), e8828, 2019
82019
PHONEMeS: Efficient modeling of signaling networks derived from large-scale mass spectrometry data
E Gjerga, A Dugourd, L Tobalina, A Sousa, J Saez-Rodriguez
Journal of Proteome Research 20 (4), 2138-2144, 2021
72021
Metabolic control of tumour extracellular matrix production in cancer-associated fibroblasts
EJ Kay, K Paterson, D Sumpton, E Stepanova, C Boldrini, ...
BioRxiv, 2020
52020
From expression footprints to causal pathways: contextualizing large signaling networks with CARNIVAL. NPJ Syst Biol Appl 5
A Liu, P Trairatphisan, E Gjerga
52019
Systems approach reveals distinct and shared signaling networks of the four PGE2 receptors in T cells
AM Lone, P Giansanti, MJ Jørgensen, E Gjerga, A Dugourd, A Scholten, ...
Science Signaling 14 (703), eabc8579, 2021
32021
Authentication of primary murine cell lines by a microfluidics-based lab-on-chip system
Y Hong, N Singh, S Bamopoulos, E Gjerga, LK Schmalbrock, ...
Biomedicines 8 (12), 590, 2020
32020
Logical modelling of cellular networks
A Niarakis, D Thieffry
32018
PYCR1-dependent proline synthesis in cancer associated fibroblasts is required for the deposition of pro-tumorigenic extracellular matrix
EJ Kay, K Paterson, C Riero-Domingo, D Sumpton, H Daebritz, S Tardito, ...
Nature Metabolism, 2022
22022
Literature and data-driven based inference of signalling interactions using time-course data
E Gjerga, P Trairatphisan, A Gabor, J Saez-Rodriguez
IFAC-PapersOnLine 52 (26), 52-57, 2019
22019
Treatment with ribociclib shows favourable immunomodulatory effects in patients with hormone receptor-positive breast cancer—findings from the RIBECCA trial
CA Peuker, S Yaghobramzi, C Grunert, L Keilholz, E Gjerga, S Hennig, ...
European Journal of Cancer 162, 45-55, 2022
12022
Prostaglandin E2 signaling networks in T cells revealed through a systems approach
AM Lone, P Giansanti, MJ Jørgensen, E Gjerga, A Dugourd, A Scholten, ...
The FASEB Journal 33 (S1), lb258-lb258, 2019
12019
Author Correction: Cancer-associated fibroblasts require proline synthesis by PYCR1 for the deposition of pro-tumorigenic extracellular matrix
EJ Kay, K Paterson, C Riera-Domingo, D Sumpton, JHM Däbritz, ...
Nature metabolism, 2022
2022
Cancer-associated fibroblasts require proline synthesis by PYCR1 for the deposition of pro-tumorigenic extracellular matrix
EJ Kay, K Paterson, C Riera-Domingo, D Sumpton, JHM Däbritz, ...
Nature metabolism 4 (6), 693-710, 2022
2022
Magnetique: An interactive web application to explore transcriptome signatures of heart failure
T Britto-Borges, A Ludt, E Boileau, E Gjerga, F Marini, C Dieterich
bioRxiv, 2022
2022
Reconstructing the functional effect of TP53 somatic mutations on its regulon using causal signalling network modelling
CP Triantafyllidis, A Barberis, AM Cuervo, P Charlton, F Hartley, ...
bioRxiv, 2022
2022
Authentication of primary murine immortalized hematopoietic progenitor cell lines by a microfluidics-based lab-on-a-chip system
Y Hong, N Nikita, S Bamopoulos, E Gjerga, LK Schmalbrock, M Schick, ...
ONCOLOGY RESEARCH AND TREATMENT 43 (SUPPL 4), 236-236, 2020
2020
Pyruvate dehydrogenase: A key to epigenetic regulation in CAFs.
E Kay, L Neilson, C Boldrini, J Hernandez-Fernaud, E Gjerga, D Sumpton, ...
CLINICAL CANCER RESEARCH 26 (13), 118-119, 2020
2020
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Articles 1–20