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Richèl J.C. Bilderbeek
Richèl J.C. Bilderbeek
Uppsala University
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babette: BEAUti 2, BEAST 2 and Tracer for R
RJC Bilderbeek, RS Etienne
Methods in Ecology and Evolution, 2018
272018
A computer-supported method to reveal and assess Personal Professional Theories in vocational education
ACM van den Bogaart, RJC Bilderbeek, H Schaap, HGK Hummel, ...
Technology, pedagogy and education 25 (5), 613-629, 2016
132016
Quantifying the impact of an inference model in Bayesian phylogenetics
RJC Bilderbeek, G Laudanno, RS Etienne
Methods in Ecology and Evolution 12 (2), 351-358, 2021
62021
DAISIE: Dynamical assembly of islands by speciation, immigration and extinction
R Etienne, LL Valente, AB Phillimore, B Haegeman, J Lambert, P Neves, ...
52020
mcbette: model comparison using babette
RJC Bilderbeek
Journal of Open Source Software 5 (54), 2762, 2020
22020
Transmembrane Helices Are an Over-Presented and Evolutionarily Conserved Source of Major Histocompatibility Complex Class I and II Epitopes
RJC Bilderbeek, MV Baranov, G van den Bogaart, F Bianchi
Frontiers in Immunology 12, 763044, 2022
12022
Quantifying the importance of an inference model in Bayesian phylogenetics
RJC Bilderbeek, G Laudanno, RS Etienne
bioRxiv, 2019.12. 17.879098, 2019
12019
Package ‘Peptides’
D Osorio, P Rondon-Villarreal, R Torres, JS Paez, LP Coelho, ...
2023
DAISIEmainland: an R package for simulating an island-mainland system for macroevolution on islands
JW Lambert, PS Neves, RS Etienne, L Valente, R Bilderbeek
EcoEvoRxiv, 2023
2023
DAISIE package for R: Dynamical Assembly of Islands by Speciation, Immigration and Extinction
R Etienne, LL Valente, AB Phillimore, B Haegeman, J Lambert, P Neves, ...
2023
nLTT package for R: Normalised Lineage-Through-Time statistic
T Janzen, R Bilderbeek, PS Neves
2022
GenomeAdmixR package for R: Simulate Admixture of Genomes
T Janzen, F Diaz, R Bilderbeek
2022
The effect of mainland dynamics on data and parameter estimates in island biogeography
JW Lambert, P Santos Neves, RJC Bilderbeek, L Valente, RS Etienne
bioRxiv, 2022.01. 13.476210, 2022
2022
Transmembrane helices are an overlooked and evolutionarily conserved source of major histocompatibility complex class I and II epitopes
RJC Bilderbeek, M Baranov, G van den Bogaart, F Bianchi
bioRxiv, 2021.05. 02.441235, 2021
2021
Call BEAST2 for Bayesian evolutionary analysis from R
R Bilderbeek
2020
Speciation and the error we make in phylogenetic inference
RJC Bilderbeek
2020
The babette R Package: How to Sooth the Phylogenetic BEAST2
R Bilderbeek
2018
Beautier: BEAUti for R
R Bilderbeek
Netherlands Annual Ecology Meeting 2018, 2018
2018
PBD package for R: Protracted Birth-Death Model of Diversification
R Etienne, R Bilderbeek
2017
Package ‘DAISIE’
RS Etienne, LM Valente, AB Phillimore, B Haegeman, MRS Etienne
2017
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