| Using motion planning to study RNA folding kinetics X Tang, B Kirkpatrick, S Thomas, G Song, NM Amato Proceedings of the eighth annual international conference on Research in …, 2004 | 78 | 2004 |
| Divide-and-conquer with sequential Monte Carlo F Lindsten, AM Johansen, CA Naesseth, B Kirkpatrick, TB Schön, ... Journal of Computational and Graphical Statistics 26 (2), 445-458, 2017 | 74 | 2017 |
| A new method for mapping discontinuous antibody epitopes to reveal structural features of proteins BM Mumey, BW Bailey, B Kirkpatrick, AJ Jesaitis, T Angel, EA Dratz Journal of Computational Biology 10 (3-4), 555-567, 2003 | 67 | 2003 |
| Pedigree reconstruction using identity by descent B Kirkpatrick, SC Li, RM Karp, E Halperin Journal of Computational Biology 18 (11), 1481-1493, 2011 | 49 | 2011 |
| Efficient continuous-time Markov chain estimation M Hajiaghayi, B Kirkpatrick, L Wang, A Bouchard-Côté International Conference on Machine Learning, 638-646, 2014 | 38 | 2014 |
| STRALCP—structure alignment-based clustering of proteins A Zemla, B Geisbrecht, J Smith, M Lam, B Kirkpatrick, M Wagner, T Slezak, ... Nucleic acids research 35 (22), e150-e150, 2007 | 33 | 2007 |
| HaploPool: improving haplotype frequency estimation through DNA pools and phylogenetic modeling B Kirkpatrick, CS Armendariz, RM Karp, E Halperin Bioinformatics 23 (22), 3048-3055, 2007 | 27 | 2007 |
| Perfect phylogeny problems with missing values B Kirkpatrick, K Stevens IEEE/ACM Transactions on Computational Biology and Bioinformatics 11 (5 …, 2014 | 23 | 2014 |
| Haplotype inference in complex pedigrees B Kirkpatrick, E Halperin, RM Karp Journal of Computational Biology 17 (3), 269-280, 2010 | 17 | 2010 |
| Comparing pedigree graphs B Kirkpatrick, Y Reshef, H Finucane, H Jiang, B Zhu, RM Karp Journal of Computational Biology 19 (9), 998-1014, 2012 | 16 | 2012 |
| Reachability bounds for chemical reaction networks and strand displacement systems A Condon, B Kirkpatrick, J Maňuch Natural Computing 13, 499-516, 2014 | 15 | 2014 |
| Non-identifiable pedigrees and a Bayesian solution B Kirkpatrick Bioinformatics Research and Applications, 139-152, 2012 | 10 | 2012 |
| Haplotypes versus genotypes on pedigrees BB Kirkpatrick Algorithms for Molecular Biology 6, 1-10, 2011 | 10 | 2011 |
| Efficient computation of the kinship coefficients B Kirkpatrick, S Ge, L Wang Bioinformatics, bty725, 2018 | 8 | 2018 |
| Turing’s Imitation Game: a discussion with the benefit of hind-sight B Kirkpatrick, B Klingner Berkeley Computer Science course. See http://www. cs. berkeley. edu …, 2009 | 8 | 2009 |
| A new model for approximating RNA folding trajectories and population kinetics B Kirkpatrick, M Hajiaghayi, A Condon Computational Science & Discovery 6 (1), 014003, 2013 | 6 | 2013 |
| Correcting for cryptic relatedness in genome-wide association studies B Kirkpatrick, A Bouchard-Côté arXiv preprint arXiv:1602.07956, 2016 | 5 | 2016 |
| Optimal state-space reduction for pedigree hidden Markov models B Kirkpatrick, K Kirkpatrick arXiv preprint arXiv:1202.2468, 2012 | 3 | 2012 |
| Efficiently Solvable Perfect Phylogeny Problems on Binary and k-State Data with Missing Values K Stevens, B Kirkpatrick Algorithms in Bioinformatics: 11th International Workshop, WABI 2011 …, 2011 | 3 | 2011 |
| Design of nucleic acid strands with long low-barrier folding pathways A Condon, B Kirkpatrick, J Maňuch Natural computing 16 (2), 261-284, 2017 | 2 | 2017 |
Eran HalperinUniversity of California, Los AngelesVerified email at cs.ucla.edu
