Ali Masoudi-Nejad, Professor

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Ali NajafiAssociate professor of Bioinformatics and Systems BiologyGeverifieerd e-mailadres voor ut.ac.ir
Zaynab MousavianKarolinska InstituteGeverifieerd e-mailadres voor ki.se
Yosef Masoudi-SobhanzadehUniversity Health NetworkGeverifieerd e-mailadres voor utoronto.ca
Ali MoeiniUniversity of TehranGeverifieerd e-mailadres voor ut.ac.ir
Abbas Nowzari-Daliniassociate prof., university of tehranGeverifieerd e-mailadres voor ut.ac.ir
Falk SchreiberProfessor, University of Konstanz and Monash UniversityGeverifieerd e-mailadres voor uni-konstanz.de
Gholamreza BidkhoriResearcher at King's College LondonGeverifieerd e-mailadres voor kcl.ac.uk
Hossein LanjanianCellular and Molecular Endocrine Research Center, Research Institute for Endocrine Sciences, ShahidGeverifieerd e-mailadres voor ut.ac.ir
Habib MotieGhaderIslamic Azad University Tabriz BranchGeverifieerd e-mailadres voor ut.ac.ir
Yazdan AsgariCESP, Team "Exposome and Heredity"Geverifieerd e-mailadres voor inserm.fr
Karim AbbasiPostdoctoral Research Fellow at Sharif University of TechnologyGeverifieerd e-mailadres voor sharif.edu
Saman Hosseini Ashtiani, PhDUniversity of GothenburgGeverifieerd e-mailadres voor gu.se
Zahra NarimaniAssistant Professor, Institute for advanced studies in Basic Sciences (IASBS), Zanjan, IranGeverifieerd e-mailadres voor iasbs.ac.ir
Massoud AmanlouProfessor of Medicinal Chemistry, Tehran University of Medical SciencesGeverifieerd e-mailadres voor tums.ac.ir
Nazanin HosseinkhanInstitute of Endocrinology and Metabolism, Iran University of Medical Sciences(IUMS)Geverifieerd e-mailadres voor ut.ac.ir
Yadollah OmidiNova Southeastern University, Full Professor at College of Pharmacy, Florida, USAGeverifieerd e-mailadres voor nova.edu
Jahan B. Ghasemi (ORCID:0000-0002...University of TehranGeverifieerd e-mailadres voor ut.ac.ir
Shuhei NasudaLaboratory of Plant Breeding, Graduate School of Agriculture, Kyoto UniversityGeverifieerd e-mailadres voor kais.kyoto-u.ac.jp
Antti PosoProfessor of Drug Design, University of Eastern FinlandGeverifieerd e-mailadres voor uef.fi
Susumu GotoDatabase Center for Life Science, Research Organization of Information and SystemsGeverifieerd e-mailadres voor dbcls.rois.ac.jp

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Ali Masoudi-Nejad, Professor

Laboratory of Systems Biology and Bioinformatics (LBB), University of Tehran

Geverifieerd e-mailadres voor ut.ac.ir - Homepage

Systems biology AI in medicine Digital pathology Microbiome in disease Multi-omics


Titel Sorteren op citaties Sorteren op jaar Sorteren op titel	Geciteerd door Geciteerd door	Jaar
Kavosh: a new algorithm for finding network motifs ZRM Kashani, H Ahrabian, E Elahi, A Nowzari-Dalini, ES Ansari, S Asadi, ... BMC bioinformatics 10, 1-12, 2009	298	2009
Predictive genomics: a cancer hallmark network framework for predicting tumor clinical phenotypes using genome sequencing data E Wang, N Zaman, S Mcgee, JS Milanese, A Masoudi-Nejad, ... Seminars in cancer biology 30, 4-12, 2015	240	2015
EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments A Masoudi-Nejad, K Tonomura, S Kawashima, Y Moriya, M Suzuki, M Itoh, ... Nucleic acids research 34 (suppl_2), W459-W462, 2006	212	2006
Reconstruction of an integrated genome-scale co-expression network reveals key modules involved in lung adenocarcinoma G Bidkhori, Z Narimani, S Hosseini Ashtiani, A Moeini, A Nowzari-Dalini, ... PloS one 8 (7), e67552, 2013	193	2013
DeepCDA: deep cross-domain compound–protein affinity prediction through LSTM and convolutional neural networks K Abbasi, P Razzaghi, A Poso, M Amanlou, JB Ghasemi, ... Bioinformatics 36 (17), 4633-4642, 2020	189	2020
MODA: an efficient algorithm for network motif discovery in biological networks S Omidi, F Schreiber, A Masoudi-Nejad Genes & genetic systems 84 (5), 385-395, 2009	187	2009
PPIevo: Protein–protein interaction prediction from PSSM based evolutionary information J Zahiri, O Yaghoubi, M Mohammad-Noori, R Ebrahimpour, ... Genomics 102 (4), 237-242, 2013	163	2013
Computational prediction of protein–protein interaction networks: algorithms and resources J Zahiri, J Hannon Bozorgmehr, A Masoudi-Nejad Current genomics 14 (6), 397-414, 2013	163	2013
Transfer of rye chromosome segments to wheat by a gametocidal system A Masoudi-Nejad, S Nasuda, RA McIntosh, TR Endo, TR Endo Chromosome Research 10, 349-357, 2002	143	2002
A hybrid gene selection algorithm for microarray cancer classification using genetic algorithm and learning automata H Motieghader, A Najafi, B Sadeghi, A Masoudi-Nejad Informatics in Medicine Unlocked 9, 246-254, 2017	129	2017
FeatureSelect: a software for feature selection based on machine learning approaches Y Masoudi-Sobhanzadeh, H Motieghader, A Masoudi-Nejad BMC bioinformatics 20, 1-17, 2019	124	2019
Alterations in cancer cell metabolism: the Warburg effect and metabolic adaptation Y Asgari, Z Zabihinpour, A Salehzadeh-Yazdi, F Schreiber, ... Genomics 105 (5-6), 275-281, 2015	121	2015
Drug databases and their contributions to drug repurposing Y Masoudi-Sobhanzadeh, Y Omidi, M Amanlou, A Masoudi-Nejad Genomics 112 (2), 1087-1095, 2020	112	2020
Drug–target interaction prediction via chemogenomic space: learning-based methods Z Mousavian, A Masoudi-Nejad Expert opinion on drug metabolism & toxicology 10 (9), 1273-1287, 2014	111	2014
Building blocks of biological networks: a review on major network motif discovery algorithms A Masoudi-Nejad, F Schreiber, ZRM Kashani IET systems biology 6 (5), 164-174, 2012	98	2012
Drug–target interaction prediction from PSSM based evolutionary information Z Mousavian, S Khakabimamaghani, K Kavousi, A Masoudi-Nejad Journal of pharmacological and toxicological methods 78, 42-51, 2016	94	2016
Deep learning in drug target interaction prediction: current and future perspectives K Abbasi, P Razzaghi, A Poso, S Ghanbari-Ara, A Masoudi-Nejad Current Medicinal Chemistry 28 (11), 2100-2113, 2021	86	2021
Drug-target and disease networks: polypharmacology in the post-genomic era A Masoudi-Nejad, Z Mousavian, JH Bozorgmehr In silico pharmacology 1, 1-4, 2013	82	2013
A multimodal deep learning-based drug repurposing approach for treatment of COVID-19 SA Hooshmand, M Zarei Ghobadi, SE Hooshmand, ... Molecular diversity 25, 1717-1730, 2021	75	2021
Controllability in cancer metabolic networks according to drug targets as driver nodes Y Asgari, A Salehzadeh-Yazdi, F Schreiber, A Masoudi-Nejad PloS one 8 (11), e79397, 2013	75	2013

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