Andreas Prlic

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Peter W. RoseUniversity of California San DiegoVerified email at ucsd.edu
Philip E. BourneUniversity of VirginiaVerified email at virginia.edu
Wolfgang BluhmUniversity of California, San DiegoVerified email at ucsd.edu
Helen M. BermanProfessor of Chemistry and Chemical BiologyVerified email at rcsb.rutgers.edu
Stephen K. Burley, M.D., D.Phil.Institute for Quantitative Biomedicine, Rutgers UniversityVerified email at proteomics.rutgers.edu
Spencer E BlivenPaul Scherrer InstituteVerified email at psi.ch
Dimitris DimitropoulosSoftware Engineer, Google Inc.Verified email at google.com
Tim HubbardHead Dept. Medical & Molecular Genetics, King's College London, Director of Bioinformatics, King'sVerified email at kcl.ac.uk
Alexander S. RoseBIOVIA, Dassault Systèmes, San Diego, CAVerified email at weirdbyte.de
Shuchismita DuttaScientific Training, Education, and Documentation Lead, RCSB Protein Data BankVerified email at rcsb.rutgers.edu
Jose M DuarteRCSB PDB, UC San DiegoVerified email at rcsb.org
Andreas DrägerJuniorprofessor for Computational Systems Biology of Infection and Antimicrobial-ResistanceVerified email at uni-tuebingen.de
Michael Heuerdishevelled.orgVerified email at acm.org
Robert D. FinnMicrobiome Informatics Team Leader, EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambs, CB10 1SDVerified email at ebi.ac.uk
Francisco S. DominguesInstitute for Biomedicine, Eurac research, BolzanoVerified email at eurac.edu
Antonina AndreevaMRC Laboratory of Molecular BIologyVerified email at mrc-lmb.cam.ac.uk
David S. HuenRetiredVerified email at wlv.ac.uk
Mark SchreiberKaleido BiociencesVerified email at kaleido.com
Matthew PocockComputing Science, Newcastle UniversityVerified email at ncl.ac.uk
Henning HermjakobHead of Molecular Systems, European Bioinformatics Institute (EMBL-EBI)Verified email at ebi.ac.uk

Andreas Prlic

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Bioinformatics Computational Biology Genomics Structural Biology


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Ensembl 2007 TJP Hubbard, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, ... Nucleic acids research 35 (suppl_1), D610-D617, 2007	1530	2007
RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy SK Burley, HM Berman, C Bhikadiya, C Bi, L Chen, L Di Costanzo, ... Nucleic acids research 47 (D1), D464-D474, 2019	991	2019
The RCSB protein data bank: integrative view of protein, gene and 3D structural information PW Rose, A Prlić, A Altunkaya, C Bi, AR Bradley, CH Christie, ... Nucleic acids research, gkw1000, 2016	957	2016
The RCSB Protein Data Bank: redesigned web site and web services PW Rose, B Beran, C Bi, WF Bluhm, D Dimitropoulos, DS Goodsell, ... Nucleic acids research 39 (suppl_1), D392-D401, 2010	690	2010
Ensembl 2008 P Flicek, I Ahmed, MR Amode, D Barrell, K Beal, S Brent, ... Nucleic acids research, gks1236, 2012	621*	2012
Recon3D enables a three-dimensional view of gene variation in human metabolism E Brunk, S Sahoo, DC Zielinski, A Altunkaya, A Dräger, N Mih, F Gatto, ... Nature biotechnology 36 (3), 272-281, 2018	558	2018
Web-based molecular graphics for large complexes AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić, PW Rose Proceedings of the 21st international conference on Web3D technology, 185-186, 2016	555	2016
The RCSB Protein Data Bank: views of structural biology for basic and applied research and education PW Rose, A Prlić, C Bi, WF Bluhm, CH Christie, S Dutta, RK Green, ... Nucleic acids research 43 (D1), D345-D356, 2015	546	2015
The RCSB Protein Data Bank: new resources for research and education PW Rose, C Bi, WF Bluhm, CH Christie, D Dimitropoulos, S Dutta, ... Nucleic acids research 41 (D1), D475-D482, 2012	509	2012
Ensembl 2006 E Birney, D Andrews, P Bevan, M Caccamo, G Cameron, Y Chen, ... D468 D470, 2004	479	2004
BioJava: an open-source framework for bioinformatics RCG Holland, TA Down, M Pocock, A Prlić, D Huen, K James, S Foisy, ... Bioinformatics 24 (18), 2096-2097, 2008	300	2008
Pre-calculated protein structure alignments at the RCSB PDB website A Prlić, S Bliven, PW Rose, WF Bluhm, C Bizon, A Godzik, PE Bourne Bioinformatics 26 (23), 2983-2985, 2010	231	2010
BioJava: an open-source framework for bioinformatics in 2012 A Prlić, A Yates, SE Bliven, PW Rose, J Jacobsen, PV Troshin, ... Bioinformatics 28 (20), 2693-2695, 2012	219	2012
Ten simple rules for the open development of scientific software A Prlić, JB Procter PLoS computational biology 8 (12), e1002802, 2012	161	2012
Structure-derived substitution matrices for alignment of distantly related sequences A Prlić, FS Domingues, MJ Sippl Protein Engineering 13 (8), 545-550, 2000	129	2000
Integrating biological data–the distributed annotation system AM Jenkinson, M Albrecht, E Birney, H Blankenburg, T Down, RD Finn, ... BMC bioinformatics 9 (8), 1-7, 2008	117	2008
GA4GH: International policies and standards for data sharing across genomic research and healthcare HL Rehm, AJH Page, L Smith, JB Adams, G Alterovitz, LJ Babb, ... Cell genomics 1 (2), 2021	108	2021
SISYPHUS—structural alignments for proteins with non-trivial relationships A Andreeva, A Prlić, TJP Hubbard, AG Murzin Nucleic acids research 35 (suppl_1), D253-D259, 2007	99	2007
Trendspotting in the Protein Data Bank. H Berman, CN Buvaneswari, DC Luigi, D Shuchismita, G Sutapa, ... FEBS letters, 2013	94	2013
Integrating sequence and structural biology with DAS A Prlić, TA Down, E Kulesha, RD Finn, A Kähäri, TJP Hubbard BMC bioinformatics 8, 1-9, 2007	89	2007

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