Comparative transcriptomic analysis reveals conserved programmes underpinning organogenesis and reproduction in land plants I Julca, C Ferrari, M Flores-Tornero, S Proost, AC Lindner, D Hackenberg, ... Nature Plants 7 (8), 1143-1159, 2021 | 72 | 2021 |
Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida C Ferrari, S Proost, M Janowski, J Becker, Z Nikoloski, D Bhattacharya, ... Nature communications 10 (1), 737, 2019 | 61 | 2019 |
Expression Atlas of Selaginella moellendorffii Provides Insights into the Evolution of Vasculature, Secondary Metabolism, and Roots C Ferrari, D Shivhare, BO Hansen, A Pasha, E Esteban, NJ Provart, ... The Plant Cell 32 (4), 853-870, 2020 | 46 | 2020 |
Analysis of an improved Cyanophora paradoxa genome assembly DC Price, UW Goodenough, R Roth, JH Lee, T Kariyawasam, M Mutwil, ... DNA research 26 (4), 287-299, 2019 | 45 | 2019 |
Ensemble gene function prediction database reveals genes important for complex I formation in Arabidopsis thaliana BO Hansen, EH Meyer, C Ferrari, N Vaid, S Movahedi, K Vandepoele, ... New Phytologist 217 (4), 1521-1534, 2018 | 27 | 2018 |
MINI-EX: integrative inference of single-cell gene regulatory networks in plants C Ferrari, NM Pérez, K Vandepoele Molecular Plant 15 (11), 1807-1824, 2022 | 26 | 2022 |
PhytoNet: comparative co-expression network analyses across phytoplankton and land plants C Ferrari, S Proost, C Ruprecht, M Mutwil Nucleic acids research 46 (W1), W76-W83, 2018 | 22 | 2018 |
Gene expression analysis of Cyanophora paradoxa reveals conserved abiotic stress responses between basal algae and flowering plants C Ferrari, M Mutwil New Phytologist, 2019 | 15 | 2019 |
Diurnal. plant. tools: comparative transcriptomic and co-expression analyses of diurnal gene expression of the Archaeplastida kingdom JWX Ng, QW Tan, C Ferrari, M Mutwil Plant and Cell Physiology, 2018 | 13 | 2018 |
Comparative transcriptomic analysis reveals conserved transcriptional programs underpinning organogenesis and reproduction in land plants I Julca, C Ferrari, M Flores-Tornero, S Proost, AC Lindner, D Hackenberg, ... BioRxiv, 2020.10. 29.361501, 2020 | 10 | 2020 |
AtRsgA from Arabidopsis thaliana is important for maturation of the small subunit of the chloroplast ribosome M Janowski, R Zoschke, LB Scharff, S Martinez Jaime, C Ferrari, S Proost, ... The Plant Journal 96 (2), 404-420, 2018 | 9 | 2018 |
MINI‐AC: inference of plant gene regulatory networks using bulk or single‐cell accessible chromatin profiles N Manosalva Pérez, C Ferrari, J Engelhorn, T Depuydt, H Nelissen, ... The Plant Journal 117 (1), 280-301, 2024 | 8 | 2024 |
Diurnal. plant. tools: comparative transcriptomic and co-expression analyses of diurnal gene expression of the Archaeplastida kingdom. WXJ Ng WeiXiong [Ng, TQW Tan QiaoWen, C Ferrari, M Mutwil | | 2020 |
Diurnal. plant. tools: comparative transcriptomic and co-expression analyses of diurnal gene expression of the Archaeplastida kingdom JW Xiong Ng, QW Tan, C Ferrari, M Mutwil bioRxiv, 658559, 2019 | | 2019 |
Comparative transcriptomic studies to predict gene function and investigate the evolution of diurnal regulation C Ferrari | | 2019 |
Ensemble gene function prediction database reveals genes important for complex I formation in Arabidopsis thaliana EH Meyer, C Ferrari, N Vaid, S Movahedi, K Vandepoele, Z Nikoloski, ... | | 2017 |
EnsembleNet: ensemble gene function predictions for Arabidopsis thaliana BO Hansen, EH Meyer, C Ferrari, N Vaid, S Movahedi, K Vandepoele, ... bioRxiv, 181396, 2017 | | 2017 |
In vitro characterization of promiscuous biotinylation by biotin ligase M Mutwil, C Ferrari, R Bernardi, A Ranieri | | |