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Wenjun Zheng
Wenjun Zheng
Professor of Physics, University at Buffalo, SUNY
Verified email at buffalo.edu - Homepage
Title
Cited by
Cited by
Year
Evidence for an Energy Scale for Quasiparticle Dispersion in Bi_ {2} Sr_ {2} CaCu_ {2} O_ {8}
PV Bogdanov, A Lanzara, SA Kellar, XJ Zhou, ED Lu, WJ Zheng, G Gu, ...
Physical review letters 85 (12), 2581-2584, 2000
3952000
Low-frequency normal modes that describe allosteric transitions in biological nanomachines are robust to sequence variations
W Zheng, BR Brooks, D Thirumalai
Proceedings of the National Academy of Sciences 103 (20), 7664-7669, 2006
2872006
A comparative study of motor-protein motions by using a simple elastic-network model
W Zheng, S Doniach
Proceedings of the National Academy of Sciences 100 (23), 13253-13258, 2003
2482003
Protein conformational transitions explored by mixed elastic network models
W Zheng, BR Brooks, G Hummer
Proteins: Structure, Function, and Bioinformatics 69 (1), 43-57, 2007
1732007
Identification of dynamical correlations within the myosin motor domain by the normal mode analysis of an elastic network model
W Zheng, B Brooks
Journal of molecular biology 346 (3), 745-759, 2005
1382005
Allosteric transitions in the chaperonin GroEL are captured by a dominant normal mode that is most robust to sequence variations
W Zheng, BR Brooks, D Thirumalai
Biophysical journal 93 (7), 2289-2299, 2007
1352007
Network of dynamically important residues in the open/closed transition in polymerases is strongly conserved
W Zheng, BR Brooks, S Doniach, D Thirumalai
Structure 13 (4), 565-577, 2005
1282005
Normal-modes-based prediction of protein conformational changes guided by distance constraints
W Zheng, BR Brooks
Biophysical journal 88 (5), 3109-3117, 2005
1112005
Probing the local dynamics of nucleotide-binding pocket coupled to the global dynamics: myosin versus kinesin
W Zheng, BR Brooks
Biophysical Journal 89 (1), 167-178, 2005
1082005
Electrostatically biased binding of kinesin to microtubules
BJ Grant, RA Cross, JA McCammon
Biophysical Journal 100 (3), 121a, 2011
832011
Evidence of protein collective motions on the picosecond timescale
Y He, JY Chen, JR Knab, W Zheng, AG Markelz
Biophysical journal 100 (4), 1058-1065, 2011
802011
Accurate flexible fitting of high-resolution protein structures into cryo-electron microscopy maps using coarse-grained pseudo-energy minimization
W Zheng
Biophysical journal 100 (2), 478-488, 2011
752011
Predicting order of conformational changes during protein conformational transitions using an interpolated elastic network model
M Tekpinar, W Zheng
Proteins: Structure, Function, and Bioinformatics 78 (11), 2469-2481, 2010
732010
Accurate flexible fitting of high-resolution protein structures to small-angle x-ray scattering data using a coarse-grained model with implicit hydration shell
W Zheng, M Tekpinar
Biophysical journal 101 (12), 2981-2991, 2011
722011
Large-scale evaluation of dynamically important residues in proteins predicted by the perturbation analysis of a coarse-grained elastic model
W Zheng, M Tekpinar
BMC structural biology 9, 1-17, 2009
712009
Molecular mechanisms underlying menthol binding and activation of TRPM8 ion channel
L Xu, Y Han, X Chen, A Aierken, H Wang, X Lu, Z Zhao, P Liang, W Yang, ...
Biophysical Journal 118 (3), 413a, 2020
692020
A unification of the elastic network model and the Gaussian network model for optimal description of protein conformational motions and fluctuations
W Zheng
Biophysical Journal 94 (10), 3853-3857, 2008
692008
Vibrational subsystem analysis: A method for probing free energies and correlations in the harmonic limit
HL Woodcock, W Zheng, A Ghysels, Y Shao, J Kong, BR Brooks
The Journal of chemical physics 129 (21), 2008
682008
Modeling protein conformational changes by iterative fitting of distance constraints using reoriented normal modes
W Zheng, BR Brooks
Biophysical journal 90 (12), 4327-4336, 2006
632006
Toward the mechanism of dynamical couplings and translocation in hepatitis C virus NS3 helicase using elastic network model
W Zheng, JC Liao, BR Brooks, S Doniach
Proteins: Structure, Function, and Bioinformatics 67 (4), 886-896, 2007
592007
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Articles 1–20