| Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019 | 16517 | 2019 |
| QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ... PeerJ Preprints, 2018 | 1154* | 2018 |
| NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice J Zhang, YX Liu, N Zhang, B Hu, T Jin, H Xu, Y Qin, P Yan, X Zhang, ... Nature biotechnology 37 (6), 676-684, 2019 | 842 | 2019 |
| A specialized metabolic network selectively modulates Arabidopsis root microbiota AC Huang, T Jiang, YX Liu, YC Bai, J Reed, B Qu, A Goossens, ... Science 364 (6440), eaau6389, 2019 | 638 | 2019 |
| A practical guide to amplicon and metagenomic analysis of microbiome data YX Liu, Y Qin, T Chen, M Lu, X Qian, X Guo, Y Bai Protein Cell 12 (5), 315-330, 2021 | 625 | 2021 |
| ImageGP: An easy‐to‐use data visualization web server for scientific researchers T Chen, YX Liu, L Huang Imeta 1 (1), e5, 2022 | 301 | 2022 |
| Expression of the nitrate transporter gene OsNRT1. 1A/OsNPF6. 3 confers high yield and early maturation in rice W Wang, B Hu, D Yuan, Y Liu, R Che, Y Hu, S Ou, YX Liu, Z Zhang, ... The Plant Cell 30 (3), 638-651, 2018 | 296 | 2018 |
| Root microbiota shift in rice correlates with resident time in the field and developmental stage J Zhang, N Zhang, YX Liu, X Zhang, B Hu, Y Qin, H Xu, H Wang, X Guo, ... Science China Life Sciences 61 (6), 613-621, 2018 | 267 | 2018 |
| EVenn: Easy to create repeatable and editable Venn diagrams and Venn networks online T Chen, H Zhang, Y Liu, YX Liu, L Huang Journal of genetics and genomics 48 (9), 863-866, 2021 | 248 | 2021 |
| ggClusterNet: An R package for microbiome network analysis and modularity‐based multiple network layouts T Wen, P Xie, S Yang, G Niu, X Liu, Z Ding, C Xue, YX Liu, Q Shen, ... Imeta 1 (3), e32, 2022 | 176* | 2022 |
| High-throughput cultivation and identification of bacteria from the plant root microbiota J Zhang, YX Liu, X Guo, Y Qin, R Garrido-Oter, P Schulze-Lefert, Y Bai Nature Protocols 16 (2), 988-1012, 2021 | 168 | 2021 |
| Reductionist synthetic community approaches in root microbiome research YX Liu, Y Qin, Y Bai Current Opinion in Microbiology 49, 97-102, 2019 | 138 | 2019 |
| A guide to human microbiome research: study design, sample collection, and bioinformatics analysis XB Qian, T Chen, YP Xu, L Chen, FX Sun, MP Lu, YX Liu Chinese Medical Journal 133 (15), 1844-1855, 2020 | 121 | 2020 |
| N2O and NO emission from a biological aerated filter treating coking wastewater: Main source and microbial community M Zheng, N Zhou, S Liu, C Dang, YX Liu, S He, Y Zhao, W Liu, X Wang Journal of Cleaner Production 213, 365-374, 2019 | 87 | 2019 |
| EasyAmplicon: An easy‐to‐use, open‐source, reproducible, and community‐based pipeline for amplicon data analysis in microbiome research YX Liu, L Chen, T Ma, X Li, M Zheng, X Zhou, L Chen, X Qian, J Xi, H Lu, ... IMeta 2 (1), e83, 2023 | 80 | 2023 |
| Fusarium fruiting body microbiome member Pantoea agglomerans inhibits fungal pathogenesis by targeting lipid rafts S Xu, YX Liu, T Cernava, H Wang, Y Zhou, T Xia, S Cao, G Berg, XX Shen, ... Nature Microbiology 7 (6), 831-843, 2022 | 78 | 2022 |
| An Arabidopsis secondary metabolite directly targets expression of the bacterial type III secretion system to inhibit bacterial virulence W Wang, J Yang, J Zhang, YX Liu, C Tian, B Qu, C Gao, P Xin, S Cheng, ... Cell host & microbe 27 (4), 601-613. e7, 2020 | 77 | 2020 |
| Recently duplicated sesterterpene (C25) gene clusters in Arabidopsis thaliana modulate root microbiota Q Chen, T Jiang, YX Liu, H Liu, T Zhao, Z Liu, X Gan, A Hallab, X Wang, ... Science China Life Sciences 62, 947-958, 2019 | 71 | 2019 |
| Gut microbiota in children with juvenile idiopathic arthritis: characteristics, biomarker identification, and usefulness in clinical prediction X Qian, YX Liu, X Ye, W Zheng, S Lv, M Mo, J Lin, W Wang, W Wang, ... BMC genomics 21, 1-13, 2020 | 58 | 2020 |
| Host-associated quantitative abundance profiling reveals the microbial load variation of root microbiome X Guo, X Zhang, Y Qin, YX Liu, J Zhang, N Zhang, K Wu, B Qu, Z He, ... Plant Communications 1 (1), 2020 | 56 | 2020 |
Yang Bai (白洋)Peking UniversityVerified email at pku.edu.cn
