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Stian Soiland-Reyes
Stian Soiland-Reyes
Technical Architect, School of Computer Science, University of Manchester
Verified email at manchester.ac.uk - Homepage
Title
Cited by
Cited by
Year
The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud
K Wolstencroft, R Haines, D Fellows, A Williams, D Withers, S Owen, ...
Nucleic acids research 41 (W1), W557-W561, 2013
8962013
PROV-O: The PROV Ontology
T Lebo, S Sahoo, D McGuinness, K Belhajjame, J Cheney, D Corsar, ...
W3C Recommendation, 2013
753*2013
Taverna, reloaded
P Missier, S Soiland-Reyes, S Owen, W Tan, A Nenadic, I Dunlop, ...
Scientific and Statistical Database Management: 22nd International …, 2010
2552010
Common workflow language, v1.0
P Amstutz, MR Crusoe, N Tijanić, B Chapman, J Chilton, M Heuer, ...
Figshare, 2016
228*2016
Workflow-centric research objects: First class citizens in scholarly discourse.
Ó Corcho, D Garijo Verdejo, K Belhajjame, J Zhao, P Missier, D Newman, ...
Informatica, 2012
1652012
PROV model primer
K Belhajjame, H Deus, D Garijo, G Klyne, P Missier, S Soiland-Reyes, ...
URL: http://www.w3.org/TR/prov-primer, 2012
143*2012
COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project
FT Bergmann, R Adams, S Moodie, J Cooper, M Glont, M Golebiewski, ...
BMC bioinformatics 15 (1), 1-9, 2014
1262014
Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data
JA McMurry, N Juty, N Blomberg, T Burdett, T Conlin, N Conte, M Courtot, ...
PLoS biology 15 (6), e2001414, 2017
1202017
PAV ontology: provenance, authoring and versioning
P Ciccarese, S Soiland-Reyes, K Belhajjame, AJG Gray, C Goble, T Clark
Journal of Biomedical Semantics 4 (37), 2013
1032013
FAIRDOMHub: a repository and collaboration environment for sharing systems biology research
K Wolstencroft, O Krebs, JL Snoep, NJ Stanford, F Bacall, M Golebiewski, ...
Nucleic acids research 45 (D1), D404-D407, 2017
982017
FAIR computational workflows
C Goble, S Cohen-Boulakia, S Soiland-Reyes, D Garijo, Y Gil, MR Crusoe, ...
Data Intelligence 2 (1-2), 108-121, 2020
922020
Open Annotation data model
R Sanderson, P Ciccarese, H Van de Sompel, S Bradshaw, D Brickley, ...
W3C Community draft, 2013
87*2013
Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv
FZ Khan, S Soiland-Reyes, RO Sinnott, A Lonie, C Goble, MR Crusoe
GigaScience 8 (11), giz095, 2019
58*2019
Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data
P Li, JI Castrillo, G Velarde, I Wassink, S Soiland-Reyes, S Owen, ...
BMC bioinformatics 9, 1-11, 2008
572008
Designing the W3C open annotation data model
R Sanderson, P Ciccarese, H Van De Sompel
Association for Computing Machinery, 2013
542013
I'll take that to go: Big data bags and minimal identifiers for exchange of large, complex datasets
K Chard, M D'Arcy, B Heavner, I Foster, C Kesselman, R Madduri, ...
2016 Ieee international conference on big data (big data), 319-328, 2016
502016
Methods Included: Standardizing Computational Reuse and Portability with the Common Workflow Language
MR Crusoe, S Abeln, A Iosup, P Amstutz, J Chilton, N Tijanić, H Ménager, ...
Communications of the ACM 65 (6), 54-63, 2022
47*2022
Community-driven development for computational biology at Sprints, Hackathons and Codefests
S Möller, E Afgan, M Banck, RJP Bonnal, T Booth, J Chilton, PJA Cock, ...
BMC bioinformatics 15, 1-7, 2014
462014
PROV-N: The provenance notation
L Moreau, P Missier, J Cheney, S Soiland-Reyes
W3C Recommendation, 2013
462013
CaGrid Workflow Toolkit: A taverna based workflow tool for cancer grid
W Tan, R Madduri, A Nenadic, S Soiland-Reyes, D Sulakhe, I Foster, ...
BMC bioinformatics 11, 1-12, 2010
432010
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