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Ali Najafi
Ali Najafi
Associate professor of Bioinformatics and Systems Biology
Geverifieerd e-mailadres voor ut.ac.ir - Homepage
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Gene selection for microarray data classification using a novel ant colony optimization
S Tabakhi, A Najafi, R Ranjbar, P Moradi
Neurocomputing 168, 1024-1036, 2015
1682015
A hybrid gene selection algorithm for microarray cancer classification using genetic algorithm and learning automata
H Motieghader, A Najafi, B Sadeghi, A Masoudi-Nejad
Informatics in Medicine Unlocked 9, 246-254, 2017
1252017
Natural antisense RNAs as mRNA regulatory elements in bacteria: a review on function and applications
F Saberi, M Kamali, A Najafi, A Yazdanparast, MM Moghaddam
Cellular & molecular biology letters 21, 1-17, 2016
852016
Classification and biomarker genes selection for cancer gene expression data using random forest
M Ram, A Najafi, MT Shakeri
Iranian journal of pathology 12 (4), 339, 2017
742017
Utilization of highly robust and selective crosslinked polymeric ionic liquid-based sorbent coatings in direct-immersion solid-phase microextraction and high-performance liquid …
I Pacheco-Fernández, A Najafi, V Pino, JL Anderson, JH Ayala, ...
Talanta 158, 125-133, 2016
672016
Cancer systems biology and modeling: microscopic scale and multiscale approaches
A Masoudi-Nejad, G Bidkhori, SH Ashtiani, A Najafi, JH Bozorgmehr, ...
Seminars in cancer biology 30, 60-69, 2015
622015
Immunoinformatic design of a COVID-19 subunit vaccine using entire structural immunogenic epitopes of SARS-CoV-2
E Behmard, B Soleymani, A Najafi, E Barzegari
Scientific reports 10 (1), 20864, 2020
542020
Molecular epidemiology of hepatitis C virus among injection drug users in Iran: a slight change in prevalence of HCV genotypes over time
K Samimi-Rad, M Nasiri Toosi, A Masoudi-Nejad, A Najafi, R Rahimnia, ...
Archives of virology 157, 1959-1965, 2012
532012
mRNA–miRNA bipartite network reconstruction to predict prognostic module biomarkers in colorectal cancer stage differentiation
H Motieghader, M Kouhsar, A Najafi, B Sadeghi, A Masoudi-Nejad
Molecular BioSystems 13 (10), 2168-2180, 2017
492017
Genome scale modeling in systems biology: algorithms and resources
A Najafi, G Bidkhori, J H Bozorgmehr, I Koch, A Masoudi-Nejad
Current genomics 15 (2), 130-159, 2014
492014
Identification of direct target genes of miR-7, miR-9, miR-96, and miR-182 in the human breast cancer cell lines MCF-7 and MDA-MB-231
H Moazzeni, A Najafi, M Khani
Molecular and cellular probes 34, 45-52, 2017
472017
The effect of theophylline on acetic acid induced ulcerative colitis in rats
M Ghasemi-Pirbaluti, E Motaghi, A Najafi, MJ Hosseini
Biomedicine & Pharmacotherapy 90, 153-159, 2017
472017
DNA microarray for rapid detection and identification of food and water borne bacteria: from dry to wet lab
R Ranjbar, P Behzadi, A Najafi, R Roudi
The open microbiology journal 11, 330, 2017
472017
Computational approach to analyze isolated ssDNA aptamers against angiotensin II
M Heiat, A Najafi, R Ranjbar, AM Latifi, MJ Rasaee
Journal of biotechnology 230, 34-39, 2016
452016
Bacterial CRISPR regions: general features and their potential for epidemiological molecular typing studies
Z Karimi, A Ahmadi, A Najafi, R Ranjbar
The open microbiology journal 12, 59, 2018
442018
Simultaneous detection of Mycoplasma pneumoniae, Mycoplasma hominis and Mycoplasma arthritidis in synovial fluid of patients with rheumatoid arthritis by multiplex PCR
RA Ataee, R Golmohammadi, GH Alishiri, R Mirnejad, A Najafi, ...
ARCHIVES OF IRANIAN MEDICINE 18 (6), 345-350, 2015
442015
Microarray long oligo probe designing for Escherichia coli: an in-silico DNA marker extraction
P Behzadi, A Najafi, E Behzadi, R Ranjbar
Central European journal of urology 69 (1), 105, 2016
422016
Identification of biomarkers in common chronic lung diseases by co-expression networks and drug-target interactions analysis
M Maghsoudloo, S Azimzadeh Jamalkandi, A Najafi, A Masoudi-Nejad
Molecular Medicine 26, 1-19, 2020
412020
GelClust: a software tool for gel electrophoresis images analysis and dendrogram generation
S Khakabimamaghani, A Najafi, R Ranjbar, M Raam
Computer methods and programs in biomedicine 111 (2), 512-518, 2013
392013
LncRNA and mRNA integration network reconstruction reveals novel key regulators in esophageal squamous-cell carcinoma
S Alaei, B Sadeghi, A Najafi, A Masoudi-Nejad
Genomics, 2019
372019
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Artikelen 1–20