| Syntrophy emerges spontaneously in complex metabolic systems E Libby, L Hébert-Dufresne, SR Hosseini, A Wagner PLoS computational biology 15 (7), e1007169, 2019 | 36 | 2019 |
| Estimating the predictability of cancer evolution SR Hosseini, R Diaz-Uriarte, F Markowetz, N Beerenwinkel Bioinformatics 35 (14), i389-i397, 2019 | 35 | 2019 |
| PROSIGN: A method for protein secondary structure assignment based on three-dimensional coordinates of consecutive Cα atoms SR Hosseini, M Sadeghi, H Pezeshk, C Eslahchi, M Habibi Computational biology and chemistry 32 (6), 406-411, 2008 | 31 | 2008 |
| PRKN, DJ‐1, and PINK1 screening identifies novel splice site mutation in PRKN and two novel DJ‐1 mutations F Ghazavi, Z Fazlali, SS Banihosseini, SR Hosseini, MH Kazemi, ... Movement disorders 26 (1), 80-89, 2011 | 25 | 2011 |
| Phenotypic innovation through recombination in genome-scale metabolic networks SR Hosseini, OC Martin, A Wagner Proceedings of the Royal Society B: Biological Sciences 283 (1839), 20161536, 2016 | 19 | 2016 |
| Exhaustive Analysis of a Genotype Space Comprising 1015 Central Carbon Metabolisms Reveals an Organization Conducive to Metabolic Innovation SR Hosseini, A Barve, A Wagner PLoS computational biology 11 (8), e1004329, 2015 | 18 | 2015 |
| Historical contingency and the gradual evolution of metabolic properties in central carbon and genome-scale metabolisms A Barve, SR Hosseini, OC Martin, A Wagner BMC systems biology 8, 1-20, 2014 | 14 | 2014 |
| Genomic organization underlying deletional robustness in bacterial metabolic systems SR Hosseini, A Wagner Proceedings of the National Academy of Sciences 115 (27), 7075-7080, 2018 | 13 | 2018 |
| The potential for non-adaptive origins of evolutionary innovations in central carbon metabolism SR Hosseini, A Wagner BMC systems biology 10, 1-14, 2016 | 13 | 2016 |
| CCSynergy: an integrative deep-learning framework enabling context-aware prediction of anti-cancer drug synergy SR Hosseini, X Zhou Briefings in bioinformatics 24 (1), bbac588, 2023 | 11 | 2023 |
| Exhaustive genotype-phenotype mapping in metabolic genotype space SR Hosseini Swiss Federal Instiute of Technology, 2013 | 3 | 2013 |
| Predicting anti-cancer drug synergy using extended drug similarity profiles SR Hosseini, X Zhou bioRxiv, 2022.08. 28.505568, 2022 | 2 | 2022 |
| Novel PRKN exon is identified F Ghazavi, Z Fazlali, SS Banihosseini, MH Kazemi, SR Hosseini, K Parsa, ... MOVEMENT DISORDERS 25 (7), S471-S471, 2010 | 2 | 2010 |
| Constraint and contingency pervade the emergence of novel phenotypes in complex metabolic systems SR Hosseini, A Wagner Biophysical journal 113 (3), 690-701, 2017 | 1 | 2017 |
| Systematic characterization of protein structural features of alternative splicing isoforms using AlphaFold 2 Y Yang, Y Xie, Z Li, CS Diala, MA Ali, R Li, Y Xu, A Wu, P Kim, ... bioRxiv, 2024.01. 30.578053, 2024 | | 2024 |
| Supplementary Material: Estimating the predictability of cancer evolution SR Hosseini, R Diaz-Uriarte, F Markowetz, N Beerenwinkel | | 2019 |
| Quantifying the predictability of cancer progression using Conjunctive Bayesian Networks SR Hosseini Swiss Federal Institute of Technology, 2018 | | 2018 |
| Phenotypic innovation, robustness and recombination in complex metabolic systems SR Hosseini Universität Zürich, 2018 | | 2018 |
