Hong-Yu Ou
Hong-Yu Ou
School of Life Sciences & Biotechnology, Shanghai Jiaotong University
Verified email at sjtu.edu.cn - Homepage
Title
Cited by
Cited by
Year
DEG: a database of essential genes
R Zhang, HY Ou, CT Zhang
Nucleic acids research 32 (suppl_1), D271-D272, 2004
4262004
TADB: a web-based resource for Type 2 toxin–antitoxin loci in bacteria and archaea
Y Shao, EM Harrison, D Bi, C Tai, X He, HY Ou, K Rajakumar, Z Deng
Nucleic acids research 39 (suppl_1), D606-D611, 2011
2532011
ZCURVE: a new system for recognizing protein‐coding genes in bacterial and archaeal genomes
FB Guo, HY Ou, CT Zhang
Nucleic acids research 31 (6), 1780-1789, 2003
2232003
ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria
D Bi, Z Xu, EM Harrison, C Tai, Y Wei, X He, S Jia, Z Deng, K Rajakumar, ...
Nucleic acids research 40 (D1), D621-D626, 2012
1842012
The Z curve database: a graphic representation of genome sequences
CT Zhang, R Zhang, HY Ou
Bioinformatics 19 (5), 593-599, 2003
1692003
Complete genome sequence of Klebsiella pneumoniae subsp. pneumoniae HS11286, a multidrug-resistant strain isolated from human sputum
P Liu, P Li, X Jiang, D Bi, Y Xie, C Tai, Z Deng, K Rajakumar, HY Ou
Journal of bacteriology 194 (7), 1841-1842, 2012
1492012
TADB 2.0: an updated database of bacterial type II toxin–antitoxin loci
Y Xie, Y Wei, Y Shen, X Li, H Zhou, C Tai, Z Deng, HY Ou
Nucleic acids research 46 (D1), D749-D753, 2018
1232018
ICEberg 2.0: an updated database of bacterial integrative and conjugative elements
M Liu, X Li, Y Xie, D Bi, J Sun, J Li, C Tai, Z Deng, HY Ou
Nucleic acids research 47 (D1), D660-D665, 2019
1022019
Role and Regulation of Fatty Acid Biosynthesis in the Response of Shewanella piezotolerans WP3 to Different Temperatures and Pressures
F Wang, X Xiao, HY Ou, Y Gai, F Wang
Journal of bacteriology 191 (8), 2574-2584, 2009
952009
SecReT6: a web‐based resource for type VI secretion systems found in bacteria
J Li, Y Yao, HH Xu, L Hao, Z Deng, K Rajakumar, HY Ou
Environmental microbiology 17 (7), 2196-2202, 2015
912015
MobilomeFINDER: web-based tools for in silico and experimental discovery of bacterial genomic islands
HY Ou, X He, EM Harrison, BR Kulasekara, AB Thani, A Kadioglu, S Lory, ...
Nucleic acids research 35 (suppl_2), W97-W104, 2007
912007
A novel strategy for the identification of genomic islands by comparative analysis of the contents and contexts of tRNA sites in closely related bacteria
HY Ou, LL Chen, J Lonnen, RR Chaudhuri, AB Thani, R Smith, NJ Garton, ...
Nucleic acids research 34 (1), e3-e3, 2006
872006
The epidemic status and genetic diversity of 14 highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV) isolates from China in 2009
Z Zhou, J Ni, Z Cao, X Han, Y Xia, Z Zi, K Ning, Q Liu, L Cai, P Qiu, ...
Veterinary microbiology 150 (3-4), 257-269, 2011
852011
Pathogenicity Islands PAPI-1 and PAPI-2 Contribute Individually and Synergistically to the Virulence of Pseudomonas aeruginosa Strain PA14
EM Harrison, MEK Carter, S Luck, HY Ou, X He, Z Deng, C O'Callaghan, ...
Infection and immunity 78 (4), 1437-1446, 2010
782010
Analysis of a genomic island housing genes for DNA S‐modification system in Streptomyces lividans 66 and its counterparts in other distantly related bacteria
X He, HY Ou, Q Yu, X Zhou, J Wu, J Liang, W Zhang, K Rajakumar, ...
Molecular microbiology 65 (4), 1034-1048, 2007
782007
Genomic analysis and temperature-dependent transcriptome profiles of the rhizosphere originating strain Pseudomonas aeruginosa M18
DQ Wu, J Ye, HY Ou, X Wei, X Huang, YW He, Y Xu
BMC genomics 12 (1), 1-17, 2011
772011
mGenomeSubtractor: a web-based tool for parallel in silico subtractive hybridization analysis of multiple bacterial genomes
Y Shao, X He, EM Harrison, C Tai, HY Ou, K Rajakumar, Z Deng
Nucleic acids research 38 (suppl_2), W194-W200, 2010
772010
Prediction of proteinase cleavage sites in polyproteins of coronaviruses and its applications in analyzing SARS-CoV genomes
F Gao, HY Ou, LL Chen, WX Zheng, CT Zhang
FEBS letters 553 (3), 451-456, 2003
772003
VRprofile: gene-cluster-detection-based profiling of virulence and antibiotic resistance traits encoded within genome sequences of pathogenic bacteria
J Li, C Tai, Z Deng, W Zhong, Y He, HY Ou
Briefings in Bioinformatics 19 (4), 566-574, 2018
752018
Complete genome sequence of hypervirulent and outbreak-associated Acinetobacter baumannii strain LAC-4: epidemiology, resistance genetic determinants and potential virulence …
HY Ou, SN Kuang, X He, BM Molgora, PJ Ewing, Z Deng, M Osby, ...
Scientific reports 5 (1), 1-13, 2015
732015
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