A. P. Jason de Koning
A. P. Jason de Koning
Assistant Professor, University of Calgary, Faculty of Medicine
Verified email at UCalgary.ca - Homepage
Cited by
Cited by
Repetitive elements may comprise over two-thirds of the human genome
APJ de Koning, W Gu, TA Castoe, MA Batzer, DD Pollock
PLoS Genet 7 (12), e1002384, 2011
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
FJ Vonk, NR Casewell, CV Henkel, AM Heimberg, HJ Jansen, ...
Proceedings of the National Academy of Sciences 110 (51), 20651-20656, 2013
The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage
HB Shaffer, P Minx, DE Warren, AM Shedlock, RC Thomson, ...
Genome biology 14 (3), 1-23, 2013
Evidence for an ancient adaptive episode of convergent molecular evolution
TA Castoe*, APJ de Koning*, HM Kim, W Gu, BP Noonan, G Naylor, ...
Proceedings of the National Academy of Sciences 106 (22), 8986-8991, 2009
Habitat association in two genetic groups of the insect-pathogenic fungus Metarhizium anisopliae: uncovering cryptic species?
MJ Bidochka, AM Kamp, TM Lavender, J Dekoning, JNA De Croos
Applied and Environmental Microbiology 67 (3), 1335-1342, 2001
Rapid microsatellite identification from Illumina paired-end genomic sequencing in two birds and a snake
TA Castoe, AW Poole, APJ de Koning, KL Jones, DF Tomback, ...
PloS one 7 (2), e30953, 2012
The Burmese python genome reveals the molecular basis for extreme adaptation in snakes
TA Castoe, APJ de Koning, KT Hall, DC Card, DR Schield, MK Fujita, ...
Proceedings of the National Academy of Sciences 110 (51), 20645-20650, 2013
Rapid identification of thousands of copperhead snake (Agkistrodon contortrix) microsatellite loci from modest amounts of 454 shotgun genome sequence
TA Castoe, AW Poole, W Gu, AP Jason de Koning, JM Daza, EN Smith, ...
Molecular Ecology Resources 10 (2), 341-347, 2010
Effects of Fis on Escherichia coli gene expression during different growth stages
MD Bradley, MB Beach, APJ de Koning, TS Pratt, R Osuna
Microbiology 153 (9), 2922-2940, 2007
The interface of protein structure, protein biophysics, and molecular evolution
DA Liberles, SA Teichmann, I Bahar, U Bastolla, J Bloom, ...
Protein Science, 2012
Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes
JA St John, EL Braun, SR Isberg, LG Miles, AY Chong, J Gongora, ...
Genome biology 13 (1), 1-12, 2012
Lifetime pharmacokinetic model for hydrophobic contaminants in marine mammals
BE Hickie, D Mackay, J de Koning
Environmental Toxicology and Chemistry: An International Journal 18 (11 …, 1999
Ancestral sequence reconstruction in primate mitochondrial DNA: compositional bias and effect on functional inference
NM Krishnan, H Seligmann, CB Stewart, APJ de Koning, DD Pollock
Molecular Biology and Evolution 21 (10), 1871-1883, 2004
Sequencing the genome of the Burmese python (Python molurus bivittatus) as a model for studying extreme adaptations in snakes
TA Castoe, APJ de Koning, KT Hall, KD Yokoyama, W Gu, EN Smith, ...
Genome biology 12 (7), 1-8, 2011
Discovery of highly divergent repeat landscapes in snake genomes using high-throughput sequencing
TA Castoe, KT Hall, ML Guibotsy Mboulas, W Gu, AP de Koning, SE Fox, ...
Genome Biology and Evolution 3, 641-653, 2011
Molecular adaptations for sensing and securing prey and insight into amniote genome diversity from the garter snake genome
BW Perry, DC Card, JW McGlothlin, GIM Pasquesi, RH Adams, ...
Genome biology and evolution 10 (8), 2110-2129, 2018
Thousands of microsatellite loci from the venomous coralsnake Micrurus fulvius and variability of select loci across populations and related species
TA Castoe, JW Streicher, JM Meik, MJ Ingrasci, AW Poole, AP Koning, ...
Molecular Ecology Resources, 2012
Rapid likelihood analysis on large phylogenies using partial sampling of substitution histories
APJ de Koning, W Gu, DD Pollock
Molecular biology and evolution 27 (2), 249-265, 2010
Dynamic nucleotide mutation gradients and control region usage in squamate reptile mitochondrial genomes
TA Castoe, W Gu, APJ De Koning, JM Daza, ZJ Jiang, CL Parkinson, ...
Cytogenetic and genome research 127 (2-4), 112-127, 2009
A multi-organ transcriptome resource for the Burmese Python (Python molurus bivittatus)
TA Castoe, SE Fox, APJ de Koning, AW Poole, JM Daza, EN Smith, ...
BMC Research Notes 4 (1), 310, 2011
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