Ilya Shmulevich

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Wei Zhang PhD, Professor of Cancer...The Comprehensive Cancer Center of Wake Forest Baptist Medical CenterVerified email at wakehealth.edu
Olli Yli-HarjaTampere University, Faculty of Medicine and Health TechnologyVerified email at tuni.fi
Edward DoughertyProfessor of Electrical and Computer Engineering, Texas A&M UniversityVerified email at ece.tamu.edu
Matti NykterTampere UniversityVerified email at tuni.fi
Theo KnijnenburgAltius Institute for Biomedical SciencesVerified email at altius.org
Da YangAssociate Professor, University of PittsburghVerified email at pitt.edu
Gregory N. FullerProfessor of Pathology, M D Anderson Cancer CenterVerified email at mdanderson.org
Stephen RamseyAssociate Professor, Oregon State UniversityVerified email at oregonstate.edu
Alan AderemSeattle BioMedVerified email at seattlebiomed.org
Gordon MillsOregon Health & Science UniversityVerified email at ohsu.edu
Ioan TabusTampere University of TechnologyVerified email at tut.fi
David L GibbsSenior Research Scientist at ISBVerified email at systemsbiology.org
Cristian Mirceanmachine learning, statisticsVerified email at globalmaritime.no
Seungchan KimChief Scientist and Executive Professor, Prairie View A&M UniversityVerified email at pvamu.edu
Vesteinn ThorssonPrincipal ScientistVerified email at systemsbiology.org
Nathan D. PriceCSO, Thorne HealthTech; Professor, Institute for Systems BiologyVerified email at systemsbiology.org
John N WeinsteinMD Anderson Cancer CenterVerified email at mdanderson.org
Boris AguilarInstitute for Systems BiologyVerified email at systemsbiology.org
Ken HessProfessor, Biostatistics, UT MD Anderson Cancer CenterVerified email at mdanderson.org
Karen Egiazarian (Eguiazarian)Professor, Computational Imaging Group, Tampere UniversityVerified email at tuni.fi

Ilya Shmulevich

Professor, Institute for Systems Biology

Verified email at systemsbiology.org - Homepage

systems biology computational biology cancer


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Comprehensive molecular characterization of human colon and rectal cancer Cancer Genome Atlas Network Nature 487 (7407), 330, 2012	7374	2012
The cancer genome atlas pan-cancer analysis project JN Weinstein, EA Collisson, GB Mills, KR Shaw, BA Ozenberger, K Ellrott, ... Nature genetics 45 (10), 1113-1120, 2013	6390	2013
Comprehensive molecular characterization of gastric adenocarcinoma Cancer Genome Atlas Research Network Nature 513 (7517), 202, 2014	5077	2014
The somatic genomic landscape of glioblastoma CW Brennan, RGW Verhaak, A McKenna, B Campos, H Noushmehr, ... cell 155 (2), 462-477, 2013	4913	2013
Integrated genomic characterization of endometrial carcinoma DA Levine, ... Nature 497 (7447), 67-73, 2013	4770	2013
The immune landscape of cancer V Thorsson, DL Gibbs, SD Brown, D Wolf, DS Bortone, THO Yang, ... Immunity 48 (4), 812-830. e14, 2018	4339	2018
Genomic classification of cutaneous melanoma R Akbani, KC Akdemir, BA Aksoy, M Albert, A Ally, SB Amin, H Arachchi, ... Cell 161 (7), 1681-1696, 2015	2650	2015
Comprehensive molecular characterization of urothelial bladder carcinoma Cancer Genome Atlas Research Network Nature 507 (7492), 315, 2014	2590	2014
The molecular taxonomy of primary prostate cancer A Abeshouse, J Ahn, R Akbani, A Ally, S Amin, CD Andry, M Annala, ... Cell 163 (4), 1011-1025, 2015	2578	2015
An integrated TCGA pan-cancer clinical data resource to drive high-quality survival outcome analytics J Liu, T Lichtenberg, KA Hoadley, LM Poisson, AJ Lazar, AD Cherniack, ... Cell 173 (2), 400-416. e11, 2018	2539	2018
Integrated genomic characterization of papillary thyroid carcinoma N Agrawal, R Akbani, BA Aksoy, A Ally, H Arachchi, SL Asa, JT Auman, ... Cell 159 (3), 676-690, 2014	2480	2014
Oncogenic signaling pathways in the cancer genome atlas F Sanchez-Vega, M Mina, J Armenia, WK Chatila, A Luna, KC La, ... Cell 173 (2), 321-337. e10, 2018	2396	2018
Comprehensive characterization of cancer driver genes and mutations MH Bailey, C Tokheim, E Porta-Pardo, S Sengupta, D Bertrand, ... Cell 173 (2), 371-385. e18, 2018	2132	2018
Cell-of-origin patterns dominate the molecular classification of 10,000 tumors from 33 types of cancer KA Hoadley, C Yau, T Hinoue, DM Wolf, AJ Lazar, E Drill, R Shen, ... Cell 173 (2), 291-304. e6, 2018	1997	2018
Probabilistic Boolean networks: a rule-based uncertainty model for gene regulatory networks I Shmulevich, ER Dougherty, S Kim, W Zhang Bioinformatics 18 (2), 261-274, 2002	1953	2002
Comprehensive and integrative genomic characterization of hepatocellular carcinoma A Ally, M Balasundaram, R Carlsen, E Chuah, A Clarke, N Dhalla, RA Holt, ... Cell 169 (7), 1327-1341. e23, 2017	1835	2017
Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020	1650*	2020
Machine learning identifies stemness features associated with oncogenic dedifferentiation TM Malta, A Sokolov, AJ Gentles, T Burzykowski, L Poisson, JN Weinstein, ... Cell 173 (2), 338-354. e15, 2018	1553	2018
Genomic and molecular landscape of DNA damage repair deficiency across the cancer genome atlas TA Knijnenburg, L Wang, MT Zimmermann, N Chambwe, GF Gao, ... Cell reports 23 (1), 239-254. e6, 2018	901	2018
Genomic and functional approaches to understanding cancer aneuploidy AM Taylor, J Shih, G Ha, GF Gao, X Zhang, AC Berger, SE Schumacher, ... Cancer cell 33 (4), 676-689. e3, 2018	840	2018

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