Sofie Van Landeghem
Sofie Van Landeghem
Freelance NLP & ML expert
Verified email at oxykodit.com - Homepage
Title
Cited by
Cited by
Year
What is stress? Dose-response effects in commonly used in vitro stress assays
H Claeys, S Van Landeghem, M Dubois, K Maleux, D Inzé
Plant physiology 165 (2), 519-527, 2014
1412014
What is stress? Dose-response effects in commonly used in vitro stress assays
H Claeys, S Van Landeghem, M Dubois, K Maleux, D Inzé
Plant physiology 165 (2), 519-527, 2014
1412014
Large-scale event extraction from literature with multi-level gene normalization
S Van Landeghem, J Björne, CH Wei, K Hakala, S Pyysalo, S Ananiadou, ...
PloS one 8 (4), e55814, 2013
1122013
Extracting protein-protein interactions from text using rich feature vectors and feature selection
S Van Landeghem, Y Saeys, B De Baets, Y Van de Peer
Proceedings of the Third International Symposium on Semantic Mining in …, 2008
752008
EVEX in ST’13: Application of a large-scale text mining resource to event extraction and network construction
K Hakala, S Van Landeghem, T Salakoski, Y Van de Peer, F Ginter
Proceedings of the BioNLP Shared Task 2013 Workshop, 26-34, 2013
502013
pico‐PLAZA, a genome database of microbial photosynthetic eukaryotes
K Vandepoele, M Van Bel, G Richard, S Van Landeghem, B Verhelst, ...
Environmental microbiology 15 (8), 2147-2153, 2013
502013
EVEX: a PubMed-scale resource for homology-based generalization of text mining predictions
S Van Landeghem, F Ginter, Y Van de Peer, T Salakoski
Proceedings of BioNLP 2011 workshop, 28-37, 2011
472011
Exploring biomolecular literature with EVEX: connecting genes through events, homology, and indirect associations
S Van Landeghem, K Hakala, S Rönnqvist, T Salakoski, Y Van de Peer, ...
Advances in bioinformatics 2012, 2012
432012
The Potential of Text Mining in Data Integration and Network Biology for Plant Research: A Case Study on Arabidopsis
S Van Landeghem, S De Bodt, ZJ Drebert, D Inzé, Y Van de Peer
The Plant Cell 25 (3), 794-807, 2013
362013
Discriminative and informative features for biomolecular text mining with ensemble feature selection
S Van Landeghem, T Abeel, Y Saeys, Y Van de Peer
Bioinformatics 26 (18), i554-i560, 2010
362010
Analyzing text in search of bio-molecular events: a high-precision machine learning framework
S Van Landeghem, Y Saeys, B De Baets, Y Van de Peer
Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task …, 2009
362009
Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks
S Van Landeghem, T Van Parys, M Dubois, D Inzé, Y Van de Peer
BMC bioinformatics 17 (1), 1-12, 2016
262016
Semantically linking molecular entities in literature through entity relationships
S Van Landeghem, J Björne, T Abeel, B De Baets, T Salakoski, ...
BMC bioinformatics 13 (S11), S6, 2012
242012
U-Compare bio-event meta-service: compatible BioNLP event extraction services
Y Kano, J Björne, F Ginter, T Salakoski, E Buyko, U Hahn, KB Cohen, ...
BMC bioinformatics 12 (1), 1-9, 2011
212011
U-Compare bio-event meta-service: compatible BioNLP event extraction services
Y Kano, J Björne, F Ginter, T Salakoski, E Buyko, U Hahn, KB Cohen, ...
BMC bioinformatics 12 (1), 1-9, 2011
212011
Cell line name recognition in support of the identification of synthetic lethality in cancer from text
S Kaewphan, S Van Landeghem, T Ohta, Y Van de Peer, F Ginter, ...
Bioinformatics 32 (2), 276-282, 2016
182016
PubMed-scale event extraction for post-translational modifications, epigenetics and protein structural relations
J Björne, S Van Landeghem, S Pyysalo, T Ohta, F Ginter, Y Van de Peer, ...
BioNLP: Proceedings of the 2012 Workshop on Biomedical Natural Language …, 2012
122012
Integration of static relations to enhance event extraction from text
S Van Landeghem, S Pyysalo, T Ohta, Y Van de Peer
Proceedings of the 2010 Workshop on Biomedical Natural Language Processing …, 2010
122010
Integrating large-scale text mining and co-expression networks: Targeting NADP (H) metabolism in E. coli with event extraction
S Kaewphan, S Kreula, S Van Landeghem, Y Van de Peer, P Jones, ...
Proceedings of the Third Workshop on Building and Evaluating Resources for …, 2012
112012
High‐precision bio‐molecular event extraction from text using parallel binary classifiers
S Van Landeghem, B De Baets, Y Van de Peer, Y Saeys
Computational Intelligence 27 (4), 645-664, 2011
112011
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Articles 1–20