Zhian Namir Kamvar
Zhian Namir Kamvar
Lesson Infrastructure Technology Developer at The Carpentries
Adresse e-mail validée de carpentries.org - Page d'accueil
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Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction
ZN Kamvar, JF Tabima, NJ Grünwald
PeerJ 2, e281, 2014
Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality
ZN Kamvar, JC Brooks, NJ Grünwald
Frontiers in genetics 6, 208, 2015
Improved inference of time-varying reproduction numbers during infectious disease outbreaks
RN Thompson, JE Stockwin, RD van Gaalen, JA Polonsky, ZN Kamvar, ...
Epidemics 29, 100356, 2019
Outbreak analytics: a developing data science for informing the response to emerging pathogens
JA Polonsky, A Baidjoe, ZN Kamvar, A Cori, K Durski, WJ Edmunds, ...
Philosophical Transactions of the Royal Society B 374 (1776), 20180276, 2019
Best practices for population genetic analyses
NJ Grünwald, SE Everhart, BJ Knaus, ZN Kamvar
Phytopathology 107 (9), 1000-1010, 2017
Spatial and temporal analysis of populations of the sudden oak death pathogen in Oregon forests
ZN Kamvar, MM Larsen, AM Kanaskie, EM Hansen, NJ Grünwald
Phytopathology 105 (7), 982-989, 2015
Adegenet: Exploratory analysis of genetic and genomic data
T Jombart, ZN Kamvar, C Collins, R Luštrik, MP Beugin, BJ Knaus, ...
The Comprehensive R Archive Network, 2020
Epidemic curves made easy using the R package incidence
ZN Kamvar, J Cai, JRC Pulliam, J Schumacher, T Jombart
F1000Research 8, 2019
EpiEstim: estimate time varying reproduction numbers from epidemic curves
A Cori, S Cauchemez, NM Ferguson, C Fraser, E Dahlqwist, PA Demarsh, ...
R package version, 2.2-1, 2019
Involving undergraduates in the annotation and analysis of global gene expression studies: creation of a maize shoot apical meristem expression database
B Buckner, J Beck, K Browning, A Fritz, L Grantham, E Hoxha, Z Kamvar, ...
Genetics 176 (2), 741-747, 2007
Population structure and phenotypic variation of Sclerotinia sclerotiorum from dry bean (Phaseolus vulgaris) in the United States
ZN Kamvar, BS Amaradasa, R Jhala, S McCoy, JR Steadman, ...
PeerJ 5, e4152, 2017
First Report of the EU1 Clonal Lineage of Phytophthora ramorum on Tanoak in an Oregon Forest
NJ Grünwald, MM Larsen, ZN Kamvar, PW Reeser, A Kanaskie, J Laine, ...
Plant Disease 100 (5), 1024-1024, 2016
Developing educational resources for population genetics in R: an open and collaborative approach
ZN Kamvar, MM López‐Uribe, S Coughlan, NJ Grünwald, H Lapp, ...
Molecular ecology resources 17 (1), 120-128, 2017
Package ‘adegenet’
T Jombart, ZN Kamvar, C Collins, R Lustrik, MP Beugin, BJ Knaus, ...
Pegas: population and evolutionary genetics analysis system
E Paradis, ZN Kamvar, T Jombart, K Brian, M Frederic
Zenodo, 2020
apex: phylogenetics with multiple genes
T Jombart, F Archer, K Schliep, Z Kamvar, R Harris, E Paradis, J Goudet, ...
Molecular ecology resources 17 (1), 19-26, 2017
Population Structure of Pythium irregulare, P. ultimum, and P. sylvaticum in Forest Nursery Soils of Oregon and Washington
JE Weiland, P Garrido, ZN Kamvar, AS Espíndola, SM Marek, ...
Phytopathology 105 (5), 684-694, 2015
epiflows: an R package for risk assessment of travel-related spread of disease
P Moraga, I Dorigatti, ZN Kamvar, P Piatkowski, SE Toikkanen, VP Nagraj, ...
F1000Research 7, 2018
Projections: Project future case incidence
T Jombart, P Nouvellet, S Bhatia, ZN Kamvar, T Taylor, S Ghozzi
The Comprehensive R Archive Network, 2020
Package ‘ggrepel’
K Slowikowski, A Schep, S Hughes, S Lukauskas, JO Irisson, ZN Kamvar, ...
Automatically Position Non-Overlapping Text Labels with ‘ggplot2, 2018
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