Zhian Namir Kamvar
Zhian Namir Kamvar
Lesson Infrastructure Technology Developer at The Carpentries
Adresse e-mail validée de carpentries.org - Page d'accueil
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Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction
ZN Kamvar, JF Tabima, NJ Grünwald
PeerJ 2, e281, 2014
13792014
Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality
ZN Kamvar, JC Brooks, NJ Grünwald
Frontiers in genetics 6, 208, 2015
4352015
Improved inference of time-varying reproduction numbers during infectious disease outbreaks
RN Thompson, JE Stockwin, RD van Gaalen, JA Polonsky, ZN Kamvar, ...
Epidemics 29, 100356, 2019
2192019
Outbreak analytics: a developing data science for informing the response to emerging pathogens
JA Polonsky, A Baidjoe, ZN Kamvar, A Cori, K Durski, WJ Edmunds, ...
Philosophical Transactions of the Royal Society B 374 (1776), 20180276, 2019
762019
Best practices for population genetic analyses
NJ Grünwald, SE Everhart, BJ Knaus, ZN Kamvar
Phytopathology 107 (9), 1000-1010, 2017
542017
Spatial and temporal analysis of populations of the sudden oak death pathogen in Oregon forests
ZN Kamvar, MM Larsen, AM Kanaskie, EM Hansen, NJ Grünwald
Phytopathology 105 (7), 982-989, 2015
482015
Adegenet: Exploratory analysis of genetic and genomic data
T Jombart, ZN Kamvar, C Collins, R Luštrik, MP Beugin, BJ Knaus, ...
The Comprehensive R Archive Network, 2020
392020
Epidemic curves made easy using the R package incidence
ZN Kamvar, J Cai, JRC Pulliam, J Schumacher, T Jombart
F1000Research 8, 2019
282019
EpiEstim: estimate time varying reproduction numbers from epidemic curves
A Cori, S Cauchemez, NM Ferguson, C Fraser, E Dahlqwist, PA Demarsh, ...
R package version, 2.2-1, 2019
272019
Involving undergraduates in the annotation and analysis of global gene expression studies: creation of a maize shoot apical meristem expression database
B Buckner, J Beck, K Browning, A Fritz, L Grantham, E Hoxha, Z Kamvar, ...
Genetics 176 (2), 741-747, 2007
252007
Population structure and phenotypic variation of Sclerotinia sclerotiorum from dry bean (Phaseolus vulgaris) in the United States
ZN Kamvar, BS Amaradasa, R Jhala, S McCoy, JR Steadman, ...
PeerJ 5, e4152, 2017
222017
First Report of the EU1 Clonal Lineage of Phytophthora ramorum on Tanoak in an Oregon Forest
NJ Grünwald, MM Larsen, ZN Kamvar, PW Reeser, A Kanaskie, J Laine, ...
Plant Disease 100 (5), 1024-1024, 2016
212016
Developing educational resources for population genetics in R: an open and collaborative approach
ZN Kamvar, MM López‐Uribe, S Coughlan, NJ Grünwald, H Lapp, ...
Molecular ecology resources 17 (1), 120-128, 2017
172017
Package ‘adegenet’
T Jombart, ZN Kamvar, C Collins, R Lustrik, MP Beugin, BJ Knaus, ...
122014
Pegas: population and evolutionary genetics analysis system
E Paradis, ZN Kamvar, T Jombart, K Brian, M Frederic
Zenodo, 2020
112020
apex: phylogenetics with multiple genes
T Jombart, F Archer, K Schliep, Z Kamvar, R Harris, E Paradis, J Goudet, ...
Molecular ecology resources 17 (1), 19-26, 2017
112017
Population Structure of Pythium irregulare, P. ultimum, and P. sylvaticum in Forest Nursery Soils of Oregon and Washington
JE Weiland, P Garrido, ZN Kamvar, AS Espíndola, SM Marek, ...
Phytopathology 105 (5), 684-694, 2015
112015
epiflows: an R package for risk assessment of travel-related spread of disease
P Moraga, I Dorigatti, ZN Kamvar, P Piatkowski, SE Toikkanen, VP Nagraj, ...
F1000Research 7, 2018
102018
Projections: Project future case incidence
T Jombart, P Nouvellet, S Bhatia, ZN Kamvar, T Taylor, S Ghozzi
The Comprehensive R Archive Network, 2020
72020
Package ‘ggrepel’
K Slowikowski, A Schep, S Hughes, S Lukauskas, JO Irisson, ZN Kamvar, ...
Automatically Position Non-Overlapping Text Labels with ‘ggplot2, 2018
72018
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